Shigella boydii Sb227 (serotype 4): SBO_3076
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Entry
SBO_3076 CDS
T00301
Symbol
ygfD
Name
(GenBank) putative nucleotide-binding protein
KO
K07588
GTPase [EC:3.6.5.-]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
SBO_3076 (ygfD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MeaB
CbiA
cobW
ATP_bind_1
AAA_29
Dynamin_N
AAA_24
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
ABB67582
ShiBASE_China:
SBO3076
UniProt:
Q31WH6
LinkDB
All DBs
Position
complement(3074147..3075142)
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AA seq
331 aa
AA seq
DB search
MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVT
GTPSAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKIRMNDLARAEAAFIR
PVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG
DDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSA
LEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYY
RQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgaagccacgctggcagaaagtattcgccgcttacgtcagggtgagcgtgcc
acactcgcccaggccatgacgctggtggaaagccgtcacccgcgtcatcaggcactaagt
acgcagctgcttgatgccattatgccgtactgcggtaacaccctgcgactgggcgttacc
ggcacccccagcgcggggaaaagtacctttcttgaggcctttggcatgttgttgattcga
gagggattaaaggtcgcggttattgcggtcgatcccagcagcccggtcactggcggtagc
attctcggggataaaatccgcatgaatgacctggcgcgtgccgaagcggcgtttattcgc
ccggtaccatcctccggtcatctgggcggtgccagtcagcgagcgcgggaattaatgctg
ttatgcgaagcggcgggttatgacgtagtgattgtcgaaacggttggcgtcgggcagtcg
gaaacagaagtcgcccgcatggtggactgttttatctcgttgcaaattgccggtggcggc
gatgatctgcagggcattaaaaaagggctgatggaagtggctgatctgatcgttatcaac
aaagacgatggcgataaccataccaatgtcgccattgcccggcatatgtacgagagtgcc
ctgcatattctgcgacgtaaatacgacgaatggcagccacgggttctgacttgtagcgca
ctggaaaaacgtggaatcgatgagatctggcacgccatcatcgagttcaaaaccgcgcta
actgccagtggtcgtttacaacaagtgcggcaacaacaatcggtggaatggctgcgtaag
cagaccgaagaagaagtactgaatcacctgttcgcgaatgaagatttcgatcgctattac
cgccagacgcttttagcggtcaaaaacaatacgctctcaccgcgcaccggcctgcggcag
ctcagtgaatttatccagacgcaatattttgattaa
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