Shigella boydii Sb227 (serotype 4): SBO_3102
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Entry
SBO_3102 CDS
T00301
Symbol
lysS
Name
(GenBank) lysine tRNA synthetase, constitutive
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBO_3102 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbo01007
]
SBO_3102 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_3102 (lysS)
Enzymes [BR:
sbo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SBO_3102 (lysS)
Amino acid related enzymes [BR:
sbo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SBO_3102 (lysS)
Transfer RNA biogenesis [BR:
sbo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SBO_3102 (lysS)
Prokaryotic type
Other AARSs
SBO_3102 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABB67606
ShiBASE_China:
SBO3102
UniProt:
Q31WF2
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All DBs
Position
3103299..3104816
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AA seq
505 aa
AA seq
DB search
MSEQHAQGADAVVDLNNELKTRREKLANLREQGIVFPNDFRRDHTSDQLHAEFDGKENEE
LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI
HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgcacagggcgctgacgcggtagtcgatcttaacaatgaactgaaa
acgcgtcgtgagaagctggcgaacctgcgtgagcagggaattgtcttcccgaacgatttc
cgtcgcgatcatacctctgaccaattgcacgcagaattcgacggtaaagagaacgaagaa
ctggaagcgctgaacatcgaagtcgccgttgctggccgcatgatgacccgccgtattatg
ggtaaagcctcttttgttaccctgcaggacgttggcggtcgtattcagctgtacgttgcc
cgtgacgatcttccggaaggcgtttacaacgagcagttcaaaaaatgggatctcggcgac
atcctcggcgcgaaaggtaaactgttcaaaaccaaaaccggcgaactgtctatccactgc
accgagctgcgtctgctgaccaaagcactgcgtccgctgccggacaaattccacggcttg
caggatcaggaagcgcgctatcgtcagcgttatctggatctcatctctaacgatgaatcc
cgcaacacctttaaagtgcgttcgcagatcctctctggcattcgccagttcatggtaaat
cgcggctttatggaagttgaaacgccgatgatgcaggtgatcccaggcggtgccgctgcg
cgtccgtttatcacccatcataacgcgctggatcttgacatgtacctgcgtatcgcgccg
gaactgtacctcaagcgtctggtggtcggtggcttcgagcgtgtattcgaaatcaaccgt
aacttccgtaacgaaggtatttccgtacgtcataacccagagttcaccatgatggaactc
tatatggcttacgcagattacaaagatctgatcgagctgaccgaatcgctgttccgtact
ctggcacaggatattctcggtaagacggaagtcacctacggcgacgtgacgctggacttc
ggtaaaccgttcgaaaaactgaccatgcgtgaagcgatcaagaaatatcgcccggaaacc
gacatggcggatctggacaacttcgactctgcaaaagcgattgctgaatctatcggcatc
cacgttgagaagagctggggtctgggccgtatcgttaccgagatcttcgaagaagtggca
gaagcacatctgattcagccgaccttcattactgaatatccggcagaagtttctccgctg
gcgcgtcgtaacgacattaacccggaaatcacagaccgctttgagttcttcatcggtggt
cgtgaaatcggtaacggctttagcgagctgaatgacgcggaagatcaggcgcagcgcttc
ctggatcaggttgccgcgaaagacgcaggtgacgacgaagcgatgttctacgacgaagat
tacgtcaccgcactggaacacggcttaccgccgacagcaggtctgggaattggtatcgac
cgtatggtaatgctgttcaccaacagccataccatccgcgacgttattctgttcccggcg
atgcgtccagtaaaataa
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