Shigella boydii Sb227 (serotype 4): SBO_3163
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Entry
SBO_3163 CDS
T00301
Symbol
yhcK
Name
(GenBank) putative FADA-type transcriptional regulator
KO
K22104
GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_3163 (yhcK)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SBO_3163 (yhcK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
LexA_DNA_bind
FadR_C
TrmB
HTH_Crp_2
Fe_dep_repress
HTH_36
DUF6432
Motif
Other DBs
NCBI-ProteinID:
ABB67663
ShiBASE_China:
SBO3163
UniProt:
Q31W95
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All DBs
Position
3167985..3168776
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AA seq
263 aa
AA seq
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MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERE
LMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGG
IAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLA
EIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRA
LQSHLNSVSATWHAFGQTTNKKK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggccttatgaacgcatttgattcgcaaaccgaagattcttcacctgcaattggtcgc
aacttgcgtagccgcccgctggcgcgtaaaaaactctccgaaatggtggaagaagagctg
gaacagatgatccgccgtcgtgaatttggcgaaggtgaacaattaccgtctgaacgcgaa
ctgatggcgttctttaacgtcgggcgtccttcggtgcgtgaagcgctggcagcgttaaaa
cgcaaaggtctggtgcaaataaacaacggcgaacgcgctcgcgtctcgcgtccttctgcg
gacactatcatcggtgagctttccggcatggcgaaagatttcctttctcatcccggtggg
attgcccatttcgaacaattacgtctgttctttgaatccagtctggtgcgctatgcggct
gaacatgccaccgatgagcaaatcgatttgctggcaaaagcactggaaatcaacagtcag
tcgctggataacaacgcggcattcattcgttcagacgttgatttccaccgcgtgctggcg
gagatccccggtaacccaatcttcatggcgatccacgttgccctgctcgactggcttatt
gccgcacgcccaacggttaccgatcaggcactgcacgaacataacaacgttagttatcaa
cagcatattgcgatcgttgatgcgatccgccgtcatgatcctgacgaagccgatcgtgcg
ttgcaatcgcatctcaacagcgtctctgctacctggcacgctttcggtcagaccaccaac
aaaaagaaataa
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