Shigella boydii Sb227 (serotype 4): SBO_3169
Help
Entry
SBO_3169 CDS
T00301
Symbol
gltD
Name
(GenBank) glutamate synthase, small subunit
KO
K00266
glutamate synthase (NADPH) small chain [EC:
1.4.1.13
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00250
Alanine, aspartate and glutamate metabolism
sbo00910
Nitrogen metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
sbo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SBO_3169 (gltD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBO_3169 (gltD)
Enzymes [BR:
sbo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
SBO_3169 (gltD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_20
Pyr_redox_2
Pyr_redox
Pyr_redox_3
NAD_binding_8
DAO
FAD_binding_3
Thi4
NAD_binding_7
FAD_oxidored
MurD-like_N
2-Hacid_dh_C
FMO-like
Shikimate_DH
HI0933_like
FAD_binding_2
AlaDh_PNT_C
NAD_binding_9
NAD_Gly3P_dh_N
Amino_oxidase
KARI_N
Fer4_7
Fer4_17
GIDA
Lycopene_cycl
3HCDH_N
EIF3I
Motif
Other DBs
NCBI-ProteinID:
ABB67669
ShiBASE_China:
SBO3169
UniProt:
Q31W89
LinkDB
All DBs
Position
complement(3174521..3175939)
Genome browser
AA seq
472 aa
AA seq
DB search
MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEQFSEGQAKAQADRCLSCGNPYCEWKCP
VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG
NIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE
IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVG
TYQSMRGGLENKDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDTAM
DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVS
GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQG
RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLEV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatgtttatcaatttatcgacctgcagcgcgttgatccgcctaagaaaccg
ctgaagatccgcaaaattgagtttgttgaaatttacgagcagttttccgaaggccaggcc
aaagcgcaggctgaccgctgcctgtcgtgcggcaacccatactgcgagtggaaatgtccg
gtacacaactacatcccgaactggctgaagctcgccaacgaggggcgtatttttgaagcg
gcggaactgtcgcaccagaccaacaccctgccggaagtttgcggacgagtctgcccgcaa
gaccgtctgtgcgaaggttcctgcactctgaacgatgagtttggcgcggtgaccatcggc
aacattgagcgttatatcaatgataaagcgttcgaaatgggctggcgtccggatatgtcc
ggcgtgaagcaaaccggtaaaaaagtggcgattatcggcgcaggcccggcaggtctggcg
tgtgcggatgtcctgacgcgtaacggcgtaaaagccgttgtcttcgaccgtcatccagaa
attggcgggctgctgaccttcggtattccggccttcaagctggaaaaagaggtaatgacg
cgtcgccgtgaaatcttcaccggcatgggtattgaattcaaactcaataccgaagtgggc
cgcgacgtgcagctggacgatctgctgagtgattacgatgccgtcttccttggcgtcggg
acttatcagtcaatgcgcggcggtctggaaaacaaagacgccgatggcgtgtacgcagcg
ctgccgttccttatcgccaacaccaaacagttaatgggctttggtgaaacccgcgacgaa
ccgttcgtcagcatggaaggcaaacgcgtggtggtccttggcggtggcgacactgcgatg
gactgcgtgcgtacgtccgtgcgccagggagcgaagcacgttacctgtgcctatcgtcgt
gatgaagagaacatgccgggttcccgccgcgaagtgaaaaacgcgcgggaagaaggcgta
gagttcaaattcaacgtccagccactggggattgaagtgaacggtaacggcaaagtcagc
ggcgtaaaaatggtacgtaccgaaatgggcgaaccggatgccaaaggccgtcgccgcgcg
gagatcgttgcaggttccgaacatatcgttccggcagatgcagtgatcatggcgtttggt
ttccgtccacacaacatggaatggctggcaaaacacagcgtcgagctggattcacaaggc
cgcatcatcgccccggaaggcagcgacaacgccttccagaccagcaacccgaaaatcttt
gctggcggcgatatcgtccgtggttccgatctggtggtaaccgctattgccgaaggtcgt
aaggcggcagacggtattatgaactggctggaagtttaa
Shigella boydii Sb227 (serotype 4): SBO_3170
Help
Entry
SBO_3170 CDS
T00301
Symbol
gltB
Name
(GenBank) glutamate synthase, large subunit
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00250
Alanine, aspartate and glutamate metabolism
sbo00910
Nitrogen metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
sbo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SBO_3170 (gltB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBO_3170 (gltB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbo01002
]
SBO_3170 (gltB)
Enzymes [BR:
sbo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
SBO_3170 (gltB)
Peptidases and inhibitors [BR:
sbo01002
]
Cysteine peptidases
Family C44
SBO_3170 (gltB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
ABB67670
ShiBASE_China:
SBO3170
UniProt:
Q31W88
LinkDB
All DBs
Position
complement(3175952..3180505)
Genome browser
AA seq
1517 aa
AA seq
DB search
MTRNPRRHALSVPVRSGSEVGFPQSLGEVHDMLYDKSLERDNCGFGLIAHIEGEPSHKVV
RTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLN
KDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWR
PRDMERRLFIARRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLES
AICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDA
APFVNETGSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMH
MEPWDGPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKG
RVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSREL
DDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQ
FAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMK
EEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPM
AVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTH
AIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAV
SRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQS
GEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALS
PEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQ
IKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQ
VNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGL
VETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICH
LNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLL
KELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQ
SKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELY
LTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAGRAGERFG
VRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRVNP
ELVEVLNVDDLAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFALVKPKSSDVKA
LLGHRSRSAAELRVQAQ
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaacccccgtcgccacgctctttctgtgcccgtgcgcagcggttcggaagtg
gggttcccgcagagcctgggggaggttcacgatatgttgtacgataaatcccttgagagg
gataactgtggtttcggcctgatcgcccacatagaaggcgaacctagccacaaggtagtg
cgtactgcaatacacgcactggcccgcatgcagcaccgtggcgcgattctcgccgatggt
aaaaccggtgacggttgcggcttgctgttacaaaaaccggatcgcttttttcgcatcgtt
gcgcaggagcgcggctggcgtttagcaaaaaactacgctgtcgggatgctcttcctgaat
aaagatcctgaactcgcggctgccgcacgccgcatcgttgaagaagagctgcaacgcgaa
accttgtcgattgtgggctggcgtgatgtccccactaacgaaggcgtgctgggtgaaatc
gccctctcctctctgccccgcattgagcaaattttcgttaacgctccggcaggctggcgt
ccgcgggatatggagcgccgtctgtttatcgcccgccgccgcattgaaaagcgtctcgaa
gccgacaaagacttctacgtctgtagcctgtcgaatctggtgaacatctataaaggtctg
tgtatgccggcggatctgccgcgcttttatctggatcttgcggacctgcgtctggaatcg
gccatctgcctgttccaccagcgcttctccactaacaccgtaccgcgctggccgctggcg
cagccgttccgctacctggcgcataacggtgaaatcaacaccatcaccggtaaccgccaa
tgggcgcgtgcgcgtacctataaattccagacgccgcttatccctgatctgcacgacgcc
gcaccgttcgtcaacgaaaccggctctgactccagttcgatggataacatgctggaactg
ctgctggcaggcgggatggatatcatccgcgccatgcgtctgttagtgccacccgcctgg
cagaacaacccggatatggacccggaactgcgtgccttctttgactttaactccatgcat
atggagccgtgggatggcccggcgggcatcgtgatgtccgacggtcgttttgccgcctgt
aacctcgaccgtaacggtctgcgtccggcgcgctacgtcatcaccaaagataagctcatc
acctgcgcctctgaagtcggtatctgggattaccagcctgacgaagtggtcgaaaaaggc
cgcgtcgggccaggcgaactgatggttatcgacacccgcagtgggcgtattctgcactcg
gcagaaaccgatgacgatctgaaaagccgccatccatataaagagtggatggagaaaaac
gtccgccgactggtaccgtttgaagatctgcccgatgaagaagtgggtagccgcgaattg
gacgacgacacgcttgccagctaccagaaacagtttaactacagtgcggaagagctggac
tccgtaattcgcgtactgggcgaaaacggtcaggaagcggtcggttcgatgggcgatgat
accccattcgccgtgctctccagtcagccgcgcattatttacgactacttccgccagcag
tttgcccaggtgactaacccgccaatcgacccgctgcgtgaagcgcatgttatgtcgctc
gccaccagtatcggtcgtgaaatgaacgtcttttgcgaagcagagggccaggcgcaccgt
ttaagctttaaatcgccgattctgctctactccgatttcaaacagctcacgacgatgaaa
gaggagcactaccgcgcagatacgctggatatcacctttgacgtcactaaaaccacgctc
gaagcgacagtcaaagagctgtgcgacaaagccgaaaaaatggtacgtagcggcaccgtg
ctgctggtgctctccgaccggaatatcgctaaagatcgcctgccggttccagccccgatg
gcggttggcgcgatccagacccgtctggtcgatcaaagcctgcgttgcgatgccaacatc
atcgtcgaaaccgccagcgcccgcgatccgcaccacttcgccgtgttgctgggcttcggc
gcgacggctatttatccataccttgcctatgaaacgctgggccgcctggtagacacccat
gcgattgccaaagattatcgtaccgtgatgctcaactaccgtaacggcatcaacaaaggc
ttgtacaaaatcatgtccaaaatgggcatctccaccatcgcctcttaccgctgctcgaaa
ctgtttgaagcggtcggtctgcacgatgatgtagtgggcctgtgcttccagggggcggtc
agccgcattggtggggcgagctttgaagacttccagcaggatctgctgaacctgtcgaaa
cgtgcctggctggcgcgtaagcccatcagccagggcggcctgctgaaatacgtccacggc
ggcgaataccacgcttacaacccggacgtggtgcgcacgctgcaacaggcggtacaaagc
ggcgagtacagcgactatcaggaatacgcgaagctggttaatgagcgtccggcaaccacg
ctgcgcgatctgctggcaattacgccgggtgaaaacgcggtcaacattgctgatgttgaa
ccggcaagcgaactgtttaaacgctttgataccgccgcgatgtctatcggcgcgttaagc
ccggaagcccacgaggcgctggcggaagcgatgaatagcatcggcggtaactcgaactcc
ggtgaaggcggcgaagacccggcgcgctatggcactaacaaagtgtcgcgcatcaagcag
gtggcttctggtcgcttcggcgttactccggcgtatctggtcaatgccgacgtcattcag
attaaagtcgcccagggcgcgaagccgggcgaaggcggtcagttgccgggcgacaaagtc
actccttacatcgccaaactgcgctattcggtgcccggagtgacgctgatctccccgccg
ccgcaccacgatatctactctatcgaggacttagcgcagctcattttcgacctcaagcag
gttaacccgaaagcgatgatctccgtgaagctggtttccgaaccgggcgtaggcaccatc
gcgactggcgtggcaaaagcttatgccgatttaatcaccatcgcaggctatgacggtggc
accggcgcaagcccgctgtcgtcagtgaaatacgcaggttgcccgtgggagctggggctt
gttgaaacccagcaggcgctggttgccaatggtctgcgtcataagatccgtttgcaggtc
gatggcggcctgaaaaccggtgttgatatcatcaaagcggcgattctcggcgcagaaagc
ttcggcttcggcactggcccaatggtcgcgctcggctgtaaatatctgcgtatttgccac
ctgaacaactgcgcaacgggtgtggcaactcaggatgacaaactgcgtaagaatcactat
cacggcctgccgttcaaggtgacgaattactttgagtttatcgcccgtgaaacccgcgag
ctgatggcacagctgggggtaacgcggctggtggatctgattggtcgcaccgacctgctg
aaagagctggacggtttcaccgccaaacagcagaaactggcgctgtcgaagctgctggag
accgccgaaccgcatccaggtaaggcactctactgcaccgaaaacaacccgccgtttgat
aacggcctgctgaacgcgcagttgctgcaacaggcgaaaccgtttgtcgatgaacgccag
agcaaaaccttctggttcgatatccgcaataccgatcgctccgtgggcgcgtcgctttca
ggctatatcgcccagacgcacggcgatcaggggctggcagccgatcctatcaaagcgtac
ttcaacggcaccgcaggccagagtttcggtgtatggaacgcgggcggcgtggaactgtac
ctgaccggggatgccaacgactatgtcggtaaaggcatggcgggcggcttaatcgccatt
cgtcctccggttggttccgccttccgcagccatgaagcaagtattatcggcaacacctgc
ctgtatggcgcgaccggtggtcgtctgtatgccgcaggccgcgcgggtgaacgtttcggc
gtgcggaactccggtgctatcaccgtggtagaaggcattggcgacaacggctgtgaatat
atgacgggcggtattgtctgtattctgggtaaaaccggcgttaacttcggtgcgggcatg
accggcggcttcgcttacgttctcgatgaaagcggtgatttccgcaaacgcgttaacccg
gaactggtcgaggtcttaaacgttgacgatctggcgatccatgaagagcatctgcgcggt
cttatcaccgagcatgttcagcatactggctctcagcgcggtgaagagattctggcgaac
tggtcaaccttcgccactaaatttgcgctggttaaaccgaagtccagtgatgtaaaagca
ctgctgggtcaccgtagtcgtagcgcagcagagttgcgcgtgcaggcgcagtaa
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integrated database retrieval system
