Shigella boydii Sb227 (serotype 4): SBO_3371
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Entry
SBO_3371 CDS
T00301
Symbol
trpS
Name
(GenBank) tryptophan tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBO_3371 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbo01007
]
SBO_3371 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_3371 (trpS)
Enzymes [BR:
sbo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SBO_3371 (trpS)
Amino acid related enzymes [BR:
sbo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SBO_3371 (trpS)
Transfer RNA biogenesis [BR:
sbo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SBO_3371 (trpS)
Prokaryotic type
SBO_3371 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Acetyltransf_10
ComFB
Motif
Other DBs
NCBI-ProteinID:
ABB67858
ShiBASE_China:
SBO3371
UniProt:
Q31VQ0
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All DBs
Position
complement(3354659..3355663)
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AA seq
334 aa
AA seq
DB search
MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKAT
LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAEN
INAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIP
KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNK
AGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEA
FLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcccatcgtttttagtggcgcacagccctcaggtgaattgaccattggtaac
tacatgggtgcgctgcgtcagtgggtaaacatgcaggatgactaccattgcatttactgt
atcgttgaccaacacgcgatcaccgtgcgccaggatgcacagaagctgcgtaaagcgacg
ctggatacgctggccttgtatctggcttgtggtatcgatcctgagaaaagcaccattttt
gttcagtcccacgtaccagaacatgcgcagttaggctgggcactgaactgctatacctac
ttcggcgaactgagccgcatgacccagtttaaagataaatctgcgcgttatgccgagaac
atcaacgctggtctgtttgactatccggtgctgatggctgcggacatcctgctgtatcaa
actaatctggtaccggtgggtgaagaccagaaacagcacctggaactgagtcgcgatatc
gcccagcgtttcaacgcgctgtatggcgagatctttaaggtgccggagccgtttattccg
aaatctggcgcgcgcgtaatgtcgctgctggagccgaccaagaagatgtccaagtctgac
gataaccgcaataacgttatcggcctgctggaagatccgaaatcggtagtgaagaaaatc
aaacgcgcggtcactgactccgacgagccgccggtagttcgctacgatgtgcagaacaaa
gcgggcgtttccaacctgctggatatcctttctgcggtaacgggccagagcatcccagaa
ctggaaaaacagttcgaaggcaagatgtatggccatctgaaaggtgaagtggctgatgcc
gtttccggtatgctgactgaattgcaggaacgctatcaccgtttccgcaacgatgaagcc
ttcctgcaacaggtgatgaaagacggcgcagaaaaagccagtgtacacgcttcccgtacg
ctgaaagcggtgtacgaagcgattggttttgtggcgaagccgtaa
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