Shigella boydii Sb227 (serotype 4): SBO_3546
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Entry
SBO_3546 CDS
T00301
Symbol
lpfA
Name
(GenBank) putative major fimbrial subunit
KO
K07345
major type 1 subunit fimbrin (pilin)
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo05131
Shigellosis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05131 Shigellosis
SBO_3546 (lpfA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbo02044
]
SBO_3546 (lpfA)
02035 Bacterial motility proteins [BR:
sbo02035
]
SBO_3546 (lpfA)
Secretion system [BR:
sbo02044
]
Chaperone-usher system
Type 1 pilus assembly protein
SBO_3546 (lpfA)
Bacterial motility proteins [BR:
sbo02035
]
Pilus system
Fimbrial proteins
SBO_3546 (lpfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fimbrial
Motif
Other DBs
NCBI-ProteinID:
ABB68028
ShiBASE_China:
SBO3546
UniProt:
Q31V80
LinkDB
All DBs
Position
complement(3556159..3556701)
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AA seq
180 aa
AA seq
DB search
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKP
VRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAG
VQQFPENTTPIPVEFAINGDGAHQLNYIASYVPIRADATIGRADATVDFTVQYSTNNFTS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaacaatacttgcgttatgcctgctgcctctttccttttcgtcattcgcggca
accacggatttagggccgaaaggaacattgaaattcacccttaaaatcagccagggtgct
tgcgaactggtgaaagacagcgttgaggttgacatgggcaccgcggttctcaaaaagccg
gtaagaatcggaacggaaattaatcccactcctttttccatcggcctgaaaaactgtagc
gaagtggtcagagcctacgtgactatggacggtacacccaatgcagacgactcaaatctt
tttgcgctggatgcgggtggcgctacaggcgttgggctgaaaatcaaaaccgctgctgga
gtacaacagttcccggaaaatacaacgccgataccggttgagtttgcaattaacggtgat
ggcgcacatcaactgaactatatcgccagctacgtgcctattcgcgccgatgcaactatt
ggtcgcgcagatgcaacggtcgactttactgtacagtacagtacgaataatttcacatct
taa
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