Shigella boydii Sb227 (serotype 4): SBO_3670
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Entry
SBO_3670 CDS
T00301
Symbol
thdF
Name
(GenBank) ThdF
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_3670 (thdF)
Transfer RNA biogenesis [BR:
sbo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SBO_3670 (thdF)
Prokaryotic type
Methyltransferases
SBO_3670 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABB68148
ShiBASE_China:
SBO3670
UniProt:
Q31UW0
LinkDB
All DBs
Position
complement(3684730..3686094)
Genome browser
AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcttcaaagcccgtgaagttgccgaaaccgtgctgggtaaactg
cctaagccgcgctacgccgattatcttccgtttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgctcgccctggtgagttttccgaacgcgcgtttcttaacgataaa
cttgacttagcccaggccgaggcgattgccgatcttatcgacgccagttcggaacaggcg
gcccgttcggcacttaactcgctgcaaggcgcattctccgcacgggttaatcatctggta
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccccgatgaagag
atcgatttcctctccgacggaaaaattgaagcccagctcaatgacgttattgccgatctt
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggcggggcgtgaa
gcggcaatcgtaaccgatatcgccggaactacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgataccgccgggctacgtgaagccagtgacgaa
gtagaacgtattggtatcgagcgcgcgtggcaggaaattgaacaggccgaccgcgtgctg
tttatggtcgatggcaccacaacagacgccgtggatccggcagagatctggccggaattt
attgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgctgggaatgagtgaagtgaacggtcacgcgttaattcgtctctcggcaagg
actggtgaaggcgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aacatggaaggcggcttcctggcgcgtcgtcgccacctacaggcgctggaacaggcagcg
gaacatctacaacagggcaaagcgcaactgttgggagcctgggcaggtgaactgctggcg
gaagagttgcgtctggcacagcagaacttaagcgaaatcaccggggaatttacttcagac
gacctgctggggcggattttctccagcttctgtattggtaagtaa
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