Shigella boydii Sb227 (serotype 4): SBO_3746
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Entry
SBO_3746 CDS
T00301
Symbol
gidA
Name
(GenBank) GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_3746 (gidA)
03036 Chromosome and associated proteins [BR:
sbo03036
]
SBO_3746 (gidA)
Transfer RNA biogenesis [BR:
sbo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SBO_3746 (gidA)
Prokaryotic type
SBO_3746 (gidA)
Chromosome and associated proteins [BR:
sbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SBO_3746 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
HI0933_like
Pyr_redox_2
Thi4
DAO
Pyr_redox
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABB68218
ShiBASE_China:
SBO3746
UniProt:
Q31UP0
LinkDB
All DBs
Position
3764163..3766052
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AA seq
629 aa
AA seq
DB search
MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV
PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatccggatccttttgacgtcatcatcattggcgggggtcatgcaggcaccgag
gccgcgatggccgcggcgcgtatgggtcaacagactctgcttttgacacacaatatcgac
actctggggcagatgagctgcaacccggcgatcggcggtattgggaagggacatctggta
aaagaagtggatgcactcggcggtctgatggcgaaagcgatcgatcaagcgggtatccag
tttaggatactaaacgcaagcaaaggaccggcggttcgcgctacccgagctcaggcggat
cgtgtgctctaccgtcaggcggtacgtacggcgctggagaaccaaccgaacctgatgatc
ttccagcaggcggttgaagatcttattgtcgaaaacgatcgcgtggtcggtgctgttacc
caaatgggactgaagttccgtgccaaagccgtcgtgctcaccgttgggacgttcctcgac
ggtaaaattcatatcggtctggataattacagcggtggccgtgctggtgatccgccgtcc
attccgctttctcgccgtttgcgtgaactgccgctgcgcgttggtcgtctgaaaaccggg
acaccaccgcgtattgatgctcgaactatcgactttagtgtgctggcgcaacagcatggc
gataacccaatgccggtattctcgtttatgggcaatgcgtcccagcatccccagcaggtg
ccgtgttatatcactcataccaacgagaaaacccatgatgtgatccgcagtaacctcgat
cgtagcccaatgtatgcaggggtgatcgaaggtgtcggcccacgctactgcccgtcgatc
gaagacaaagtcatgcgcttcgccgacagaaatcagcatcagatcttccttgaaccggaa
ggactgacctctaatgaaatttatccgaacggtatctccaccagcctgccgttcgatgtg
cagatgcaaatcgtccgctctatgcaggggatggaaaacgcgaagatcgtgcgtccgggt
tatgccattgagtatgacttcttcgatcctcgcgacctgaaaccgacgctggagagcaag
tttatccaggggctgttctttgctggtcagattaacggcactaccggttacgaagaagcc
gctgcgcaaggtttgctggccggtcttaacgctgcccgtctgtctgctgacaaagaaggt
tgggctccggcacgttctcaggcgtatctcggcgtactagttgatgacctgtgcacttta
ggaaccaaagaaccgtatcgtatgtttacttcgcgcgcagaatatcgtctgatgctacgc
gaagataatgcggatctgcgtttgactgaaatcggtcgtgaactgggcctggtggatgac
gaacgttgggcgcgctttaacgagaaacttgagaatatcgagcgtgagcgtcagcgtctg
aaatcgacctgggtaaccccgtcggcggaagctgcagccgaagtgaatgctcacctgact
gcgccgctttcccgtgaagccagtggtgaagatctgctgcgtcgtccggaaatgacttat
gaaaaattaaccacgctgacgccgtttgcccctgcgttgacagacgaacaggcggcggaa
caggttgagattcaggttaaatacgaaggttatatcgcgcgccagcaagatgagatcgaa
aagcagctgcgtaacgagaacaccctgctacccgcgacactggattaccgccaggtatcc
ggtctttctaacgaagtgatcgccaaacttaacgatcacaaaccagcctctatcggccaa
gcttcgcgtatttctggcgtcacgcctgcggctatctccattctgctggtgtggctgaaa
aaacagggtatgctgcgtcgtagcgcataa
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