Shigella boydii Sb227 (serotype 4): SBO_3799
Help
Entry
SBO_3799 CDS
T00301
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00521
Streptomycin biosynthesis
sbo00523
Polyketide sugar unit biosynthesis
sbo00525
Acarbose and validamycin biosynthesis
sbo00541
Biosynthesis of various nucleotide sugars
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01250
Biosynthesis of nucleotide sugars
Module
sbo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
sbo_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SBO_3799 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SBO_3799 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
SBO_3799 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SBO_3799 (rffG)
00525 Acarbose and validamycin biosynthesis
SBO_3799 (rffG)
Enzymes [BR:
sbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SBO_3799 (rffG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
ABB68262
ShiBASE_China:
SBO3799
UniProt:
Q31UJ6
LinkDB
All DBs
Position
3822008..3823075
Genome browser
AA seq
355 aa
AA seq
DB search
MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDI
CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLT
EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA
TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLR
YAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattctgataacaggtggtgccgggtttattggctcggcgctggtgcgttat
atcatcaacgaaacgagcgacgcggtggtagtggtcgataagctgacctacgccggaaac
ctgatgtcgctggcaccggtcgcgcaaagcgatcgctttgcctttgagaaagttgatatc
tgcgatcgggcagaactggcacgcgtattcactgagcatcagccagactgtgtcatgcat
ctggcagccgaaagccatgttgaccgttctattgacggcccggcagcgtttattgaaacc
aacattgtcgggacttatacattgcttgaagcggcgcgggcttactggaatacgctgacg
gaagataaaaaatcagcgttccgttttcatcatatctccaccgacgaagtatatggtgac
ctgcactcgacggatgatttcttcaccgaaaccacgccgtatgcgccgagcagcccttat
tccgcgtcaaaagccagcagcgaccatctggtgcgcgcctggctgcggacctacggtctg
ccgacgcttatcaccaactgctcgaataactacggtccttaccactttccggaaaaactg
atcccgctgatgatcctcaacgcgctggcgggtaaaccgctgccggtatatggcaacggg
cagcaaatccgtgactggctgtatgtggaagatcacgcccgcgcgctgtattgcgtggcg
accaccgggaaagtcggtgaaacctataatattggtggtcacaacgagcgtaagaatctc
gatgttgtggaaaccatttgcgagctgctggaagaactggctccgaacaagccgcacggc
gtggtgcactatcgtgacttgatcacctttgtcgctgaccgtccggggcatgatctgcgt
tatgccattgatgcttcgaaaattgcccgtgaacttggctggctgccacaggaaaccttt
gaaagtggaatgcgtaaaacggtgcagtggtatctggctaatgaaagctggtggaagcag
gtgcaggacggcagctatcagggcgagcgtttaggtctgaaaggctaa
DBGET
integrated database retrieval system