Shigella boydii Sb227 (serotype 4): SBO_4039
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Entry
SBO_4039 CDS
T00301
Symbol
iclR
Name
(GenBank) repressor of aceBA operon
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_4039 (iclR)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SBO_4039 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
HTH_20
DUF7343
Dimerisation
TrmB
Motif
Other DBs
NCBI-ProteinID:
ABB68473
ShiBASE_China:
SBO4039
UniProt:
Q31TY5
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All DBs
Position
complement(4079444..4080307)
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AA seq
287 aa
AA seq
DB search
MKMIPTMQKKETVMVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALT
ELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHP
ILRNLMEESGETVNMEVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLA
QLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACI
FDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattcccacgatgcagaaaaaggagactgtcatggtcgcacccattcccgcg
aaacgcggcagaaaacccgccgttgccaccgcaccagcgactggacaggttcagtcttta
acgcgtggcctgaaattactggagtggattgccgaatccaatggcagtgtggcactcacg
gaactggcgcaacaagccgggttacccaattccacgacccaccgcctgctaaccacaatg
caacagcagggtttcgtgcgtcaggttggcgaactgggacactgggcaatcggcgcacat
gcctttatggtcggcagcagctttctccagagtcgtaatttgttagcaattgttcaccct
atcctgcgcaatctaatggaagagtctggcgaaacggtcaatatggaggtgcttgatcaa
agcgatcacgaagcgattattatcgaccaggtacagtgtacgcatctgatgcgaatgtcc
gcgcctatcggcggtaaattgccgatgcacgcttccggtgcaggtaaagcctttttagcc
caactgagcgaagaacaggtgacgaagctgctgcaccgcaaagggttacatgcctatacc
cacgcaacgctggtgtctcctgtgcatttaaaagaagatctcgcccaaacgcgcaaacgg
ggttattcatttgacgatgaggaacatgcgctggggctacgttgccttgcagcgtgtatt
ttcgatgagcaccgtgaaccgtttgccgcaatttctatttccggaccgatttcacgtatt
accgatgaccgcgtgaccgagtttggcgcaatggtgattaaagcggcgaaggaagtgaca
ctggcgtacggtggaatgcgctga
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