Shigella boydii Sb227 (serotype 4): SBO_4073
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Entry
SBO_4073 CDS
T00301
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbo02000
]
SBO_4073 (dinF)
Transporters [BR:
sbo02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
SBO_4073 (dinF)
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF7775
Motif
Other DBs
NCBI-ProteinID:
ABB68506
ShiBASE_China:
SBO4073
UniProt:
Q31TV2
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All DBs
Position
complement(4114538..4115917)
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AA seq
459 aa
AA seq
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MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSP
VYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPV
ILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEM
LKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAY
ALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTS
LTQIQQLADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLP
WLGNHALWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaggcgtcgcggtttgtttttcatctctcttcatcaggcttgtctgcatggca
ttcctcacttcatctgataaagcactctggcatctcgccttacccatgattttctccaat
atcaccgttccgttgctgggactggtcgatacggcggtaattggtcatcttgatagtcca
gtttatttgggcggcgtggcggttggtgcaacggcgaccagctttctctttatgctgttg
ctgtttttacgcatgagcaccaccgggctgactgcgcaggcttatggtgccaaaaatcct
caggcattagcccgtgcgctggtgcaaccgttgctgttggcgttgggggcaggggcgtta
attgcgctgctgcgtacaccgattatcgatctggcactgcatattgttggcggtagtgaa
gcagtcctggaacaggcgcggcgctttcttgaaatccgctggttaagcgcaccggcgtca
ctggcgaatctggtattacttggttggttactcggcgtgcaatatgcccgtgcgccagta
attttgttagtggtcggcaatatcctcaacattgtgctggatgtctggctggtgatgggg
ctgcatatgaacgtgcagggcgcggcgctggcgacggttattgcggaatatgcaacattg
ctgattggtctgctaatggtgcgtaaaatcctcaaactacgcggaatttccggcgaaatg
ctgaaaactgcctggcgaggaaacttccgtcgcttgctggcgcttaaccgcgatatcatg
ctgcgttcgctgttgttgcaactctgtttcggcgcgatcaccgtacttggtgcgcgactg
gggagtgacattatcgctgttaacgcggttctgatgacgctactcacctttaccgcctat
gcgctggatggttttgcctacgcggttgaagcgcattccggtcaggcgtacggtgcgcgc
gacggtagccagttgctggatgtctggcgggcagcgtgccgccagtcggggatcgtagcg
ttactgttttcggtagtttatttgctggcaggggaacacatcattgcgttgctgacgtcg
ttaacccagattcagcagctggccgaccgctatcttatctggcaggtgattttgccgttg
gttggcgtctggtgttatctgctggacggcatgtttataggcgcaacgcgcgcagccgaa
atgcgtaacagtatggcggtggccgccgcaggttttgcgctgacgctccttacgctgccg
tggctgggtaatcatgctttgtggctggcgttaaccgtctttctggcgttgcgcgggctt
tctctggcggctatctggcggcgtcactggcgcaacggtacctggtttgccgcaacgtga
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