Shigella boydii Sb227 (serotype 4): SBO_4205
Help
Entry
SBO_4205 CDS
T00301
Symbol
treR
Name
(GenBank) treR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_4205 (treR)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SBO_4205 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
Peripla_BP_4
HTH_AraC
HTH_38
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABB68631
ShiBASE_China:
SBO4205
UniProt:
Q31TH7
LinkDB
All DBs
Position
4255153..4256118
Genome browser
AA seq
321 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYTEAGRQAACQLIAQVT
GRSEPQQIIIPATLSRSFPER
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacccgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgcctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagagttctatgaacaaggttacgacccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcacagtgacgtgacgaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgctctgccaggccttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccgttaatgaaattcctccatccggagatcgtcaccgta
gatcccggttacaccgaagctggacgccaggcggcctgccagttgatcgcacaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtccagatcgtttcctgaa
cgataa
DBGET
integrated database retrieval system
