Shigella boydii Sb227 (serotype 4): SBO_4326
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Entry
SBO_4326 CDS
T00301
Symbol
fumB
Name
(GenBank) fumarase B
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00020
Citrate cycle (TCA cycle)
sbo00620
Pyruvate metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
sbo01200
Carbon metabolism
Module
sbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SBO_4326 (fumB)
00620 Pyruvate metabolism
SBO_4326 (fumB)
Enzymes [BR:
sbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SBO_4326 (fumB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
Motif
Other DBs
NCBI-ProteinID:
ABB68742
ShiBASE_China:
SBO4326
UniProt:
Q31T66
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All DBs
Position
complement(4375732..4377378)
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AA seq
548 aa
AA seq
DB search
MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASF
MLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGIAIIVGKKGQR
VWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYAVDGDEYKF
LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAET
NLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQFGGKYFAHDIRV
IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPQELRQAGEGEAVK
VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIY
YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGF
YLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVN
KQCANCTK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaccctttatctaccaggcacctttcccgatggggaaagacaataccgaa
tactatctactcacttccgattacgttagcgttgccgacttcgacggcgaaaccatcctg
aaagtggaaccagaagccctgaccctgctggcgcagcaagcctttcacgacgcttctttt
atgctccgcccggcacaccagaaacaggttgcggctattcttcacgatccagaagccagc
gaaaacgacaagtacgtggcgctgcaattcttaagaaattccgaaatcgccgccaaaggc
gtgctgccgacctgccaggataccggcatcgcgatcatcgtcggtaaaaaaggccagcgc
gtgtggaccggcggcggtgatgaagaagcgctgtcgaaaggcgtctataacacctatatc
gaagataacctgcgctattcacagaatgcggcgctggacatgtacaaagaggtcaacacc
ggcactaacctgcctgcgcaaatcgacctgtacgcggtagatggcgatgagtacaaattc
ctttgcgttgcgaaaggcggcggctctgccaacaaaacgtatctctaccaggaaaccaaa
gccctgctgactcccggcaaactgaaaaacttcctcgtcgagaaaatgcgtaccctcggt
actgcagcctgcccgccgtaccatatcgcgtttgtgattggcggtacgtctgcggaaacc
aacctgaaaaccgtcaagttagcaagcgctcactattacgatgaactgccgacggaaggg
aacgaacatggtcaggcgttccgcgatgtccagctggaacaggaactgctggaagaggcc
cagaaactcggtcttggcgcgcagtttggcggtaaatacttcgcgcacgacattcgcgtt
atccgtctgccacgtcacggcgcatcctgcccggtcggcatgggcgtctcctgctccgct
gaccgtaacattaaagcgaaaatcaaccgcgaaggtatctggatcgaaaaactggaacac
aacccaggccagtacattccacaagaactgcgccaggccggtgaaggcgaagcggtgaaa
gttgaccttaaccgcccgatgaaagagatcctcgcccagctttcgcaatacccggtatcc
actcgtttgtcgctcaccggcaccattatcgtgggccgagatattgcacacgccaagctg
aaagagctgattgacgccggtaaagaacttccgcagtacatcaaagatcacccgatctac
tacgcgggtccggcgaaaacccctgccggttatccatcaggttcacttggcccaaccacc
gcaggccgtatggactcctacgtggatctgctgcaatcccacggcggcagcatgatcatg
ctggcgaaaggtaaccgcagtcagcaggttaccgacgcgtgtcataaacacggcggcttc
tacctcggtagcatcggcggtccggcggcggtactggcgcagcagagcatcaagcatctg
gaatgcgtcgcttatccggagctgggtatggaagctatctggaaaatcgaagtagaagat
ttcccggcgtttatcttggtcgatgacaaaggtaacgacttcttccagcaaatcgtcaac
aaacagtgcgcgaactgcactaagtaa
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