Shigella boydii Sb227 (serotype 4): SBO_4329
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Entry
SBO_4329 CDS
T00301
Symbol
yjdH
Name
(GenBank) putative 2-component sensor protein
KO
K07701
two-component system, CitB family, sensor histidine kinase DcuS [EC:
2.7.13.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBO_4329 (yjdH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sbo01001
]
SBO_4329 (yjdH)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sbo02022
]
SBO_4329 (yjdH)
Enzymes [BR:
sbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SBO_4329 (yjdH)
Protein kinases [BR:
sbo01001
]
Histidine kinases
CitB family [OT]
SBO_4329 (yjdH)
Two-component system [BR:
sbo02022
]
CitB family
DcuS-DcuR (C4-dicarboxylate metabolism)
SBO_4329 (yjdH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
sCache_3_2
PAS
HATPase_c_5
dCache_1
SPOB_a
HATPase_c_2
PAS_10
PAS_9
PAS_8
sCache_3_3
PAS_4
PDZ
Diguanyl_cycl_sensor
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABB68745
ShiBASE_China:
SBO4329
UniProt:
Q31T63
LinkDB
All DBs
Position
complement(4380083..4381714)
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AA seq
543 aa
AA seq
DB search
MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQISDMTRDGLANKALAVA
RTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPF
KGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQIGVVVSGLELSRVTQQINDSR
WSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDD
RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL
LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILG
LLHLKSYKQLEDYSLKTANNYKEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSE
SLLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGI
APDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGER
SNR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagacattcattgccctaccgcatgttactcaaacgtccgatgaaattgagtaccaca
gtgatcttaatggtcagcgcggtacagttctcggtgctattggtggtgcatctgatttac
ttctcgcaaatcagtgatatgacacgagacgggctggccaacaaggcactggcagtggcg
cgtaccctcgccgactcgccggaaatccgtcagggcttgcagaaaaaaccgcaggagagc
ggaatccaggccatcgcggaagccgtgcgcaaacgcaacgatctgctgtttattgtcgtt
acggatatgcaaagtcttcgctactcgcatcctgaagcccagcgtattggtcagccattt
aaaggtgatgacatccttaaagcgctgaatggcaaagaaaatgtcgctatcaatcgcggt
tttctggcgcaggctttacgcgtatttacccccatctacgatgaaaatcataaacaaatt
ggcgtggtggtgagcggccttgagttaagccgcgtgacccaacaaatcaatgacagtcgc
tggagcattatctggtcggtattatttggcatgctggtcggactgattggcacctgcatt
ctggttaaggtactgaaaaaaatccttttcggcctggaaccctacgaaatctccacgctg
tttgagcagcgccaggccatgttgcagtctatcaaagaaggcgtcgttgccgtggacgat
cgcggcgaggtcacgctgatcaacgatgccgcacaagaattgctgaattaccgtaagtcg
caggacgatgagaaactgtcgacgctaagccactcatggtcacaggtggtagatgtctcg
gaagtgttacgcgacggtacgccgcgccgcgacgaagagattacgattaaagaccggcta
ttactgatcaacaccgttccggtgcgcagtaatggcgttatcatcggtgccatttcaacc
ttcagggacaaaactgaagttcgtaaactgatgcagcgactcgacggtctggtcaactat
gctgatgcacttcgtgaacgatcccacgaatttatgaataaattgcatgtgattctcgga
ttattgcatctgaagagttataagcagttggaagattacagtctcaaaacagccaataac
tataaggaagagattggctctctgctgggtaagatcaaatctccggttatcgctggtttt
ttaatcagcaagattaaccgcgcgaccgatttaggccatacgctgattttaaacagtgaa
agcctgctgccagacagcggcagtgaggaccaggtcgcgacgctgattaccacattggga
aatctgatagaaaacgcgctggaagcattagggccggaacccggtggcgaaattagcgta
acattgcactaccgtcacggctggctgcactgcgaagttaacgatgatggaccggggatc
gcacccgacaaaatcgatcacatttttgacaaaggtgtctcgacaaaaggaagcgagcga
ggcgtcggtttagcacttgtcaaacaacaggtagaaaatctcggcggcagcatcgccgtg
gaatcggaacccgggattttcacacaattttttgtccagataccctgggacggggagagg
tcaaacagatga
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integrated database retrieval system
