Serratia bockelmannii: ACSJLU_000711
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Entry
ACSJLU_000711 CDS
T11865
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sboc Serratia bockelmannii
Brite
KEGG Orthology (KO) [BR:
sboc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sboc03021
]
ACSJLU_000711 (rapA)
Transcription machinery [BR:
sboc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACSJLU_000711 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
COG2_N
Motif
Other DBs
NCBI-ProteinID:
XYK20336
LinkDB
All DBs
Position
complement(758667..761573)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPITRVMFNPGDT
VSSHEGWQLQVEEVKEENGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYAEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELADAQWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPNRFHDYGEFVAEQQKYRPVADAVTLLL
SGERLADDKLNLLGELIDEQDIEPLLKAANSEGDNAEQARQELVAMLMDRHGTSRVLFRN
TRNGVKGFPHRNLHQIKLPLPTQYQTAIKVSGIMGAKKSVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLLANRNEKVLVICAKADTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIMVPYLEHTAQAVLGRWFHEGLDAFEHTCPTGRTIYDSCYEQLIGYLAAPTEQ
EGLDEFIHACRQQHDQLKAQLEQGRDRLLEMHSNGGDKAQALAAAIAEQDNDVNLVGFAL
NLFDIVGINQEDRSDSLIVLTPSDHMLVPDFPGLPQDGCTVTFDRDQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKTLPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEAQAR
QLIEQAKQEADDKLSAELARLEALKAVNPNIRDDEVETLEFNRRQVLANLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgctggatcagcgacacggaaagcgaattaggactgggc
accgtcgtggcgctggacgcgcgcatggttaccctgcttttccccgccaccggtgaaaac
cgcctctatgccagaaatgattcgccgatcacccgcgtgatgttcaacccgggcgatacc
gtcagcagccacgagggatggcagctgcaggtggaagaggtgaaagaggaaaacggtctg
ttgacctatatcggcacccgcctggacacccaggaaagcggcgtggcgatgcgcgaagtg
ctgctggacagcaaactgaccttcagcaagccgcaggatcgcctgttcgccggccaaatc
gaccgcatggatcgtttcgcgctgcgttttcgcgcccgcaaataccagagcgagcagtat
cgcctgccgttcgccggcctgcgcggcatgcgcgccagcctgatcccgcaccagctgcac
atcgctcatgaagtcggccagcgccatgcgccgcgcgttctgctggcggacgaagtcggc
ctcggcaaaaccatcgaagccggcatgatcatccaccagcaactgctggcgggccgcgcc
gaacgcgtgctgatcgtggtgccggaaacgctgcagcaccagtggctggtggagatgatg
cgccgcttcaacctctacttctcgctgttcgacgacagccgctacgccgaagccaagctc
gacagcagcaacccgttcgagaccgaacagctggtgatctgctcgctggacttcgtgcgc
cgcaacaagcagcgcctggaagaactggcggacgcccagtgggatctgctggtggtcgat
gaagcgcaccacctggcctggagcgaagaagcgccgagccgcgaatatcaggtgatcgaa
cagctggccgagcatatccctggcgtgctgctgctgaccgccaccccggaacagctgggc
caacagagccactttgcgcgcctgcgcctgctcgatccgaaccgtttccacgactacggc
gagttcgtcgccgaacagcagaaataccgtccggtggccgacgccgtcaccctgctgctg
agcggtgaacgcctggccgacgacaagctgaacctgctgggcgagctgatcgacgagcag
gacatcgaaccgctgctcaaagcggccaacagcgaaggcgacaacgccgagcaggcgcgc
caggagctggtggccatgctgatggatcgccacggcaccagccgcgtgctgttccgcaac
acccgcaacggcgtgaagggcttcccgcaccgcaacctgcaccagatcaagctgccgttg
ccaacccagtatcagaccgcgatcaaagtgtccggcatcatgggcgccaagaaatccgtc
gaagcgcgcgcgcgcgacatgctgtacccggagcagatctaccaagaattcgaaggcgaa
aacgccacctggtggaacttcgacccgcgcgtcgaatggttgctggattacctgctggcc
aaccgtaacgaaaaagtgctggtgatctgcgccaaagccgacaccgcgctgcagctggag
caggtgctgcgcgaacgtgaagcgatccgcgccgcggtgttccacgaagggctgtcgatc
atcgagcgcgaccgcgccgccgcctacttcgcctccgaagaggaaggcgcgcaggtgctg
ctgtgttccgagatcggctccgaaggccgcaacttccagttcgccagccagctggtgatg
ttcgatctgccgttcaacccggatctgctggaacagcgtatcggccgtctggaccgtatc
ggccagatgcacgatatccaaatcatggtgccttacctggagcacaccgcacaggcggtg
ctgggccgctggttccacgaagggctcgacgccttcgaacacacctgcccgaccggccgc
accatctacgacagctgctacgagcagttgatcggctatctggccgcgccgaccgagcag
gaaggcctggacgaattcatccacgcctgccgccagcagcacgatcagttgaaagcgcag
ctggaacaaggccgcgaccgtctgctggagatgcactccaacggcggcgacaaagcccag
gcgctggccgccgccatcgccgagcaggataacgacgtcaacctggtaggcttcgcgctc
aacctgttcgacattgtcggcatcaatcaggaagaccgcagcgacagcctgatcgtgctg
acgccgtccgaccatatgctggtgccggacttcccgggcctgccgcaggacggctgcacc
gtgaccttcgaccgcgatcaggcgctgtcgcgcgaagacgcgcagttcgtcagctgggag
cacccgatcatccgcaatggcctggatctgatcctgtccggcgataccggcagctgcgcg
gtgtccctgttgaaaaacaaaacgctgccggttggcaccctgctggtggaactggtctat
gtggtggaggcccaggcgccgaaacacctgcagctgacccgcttcctgccaccgacgccg
atccgcatgctgatggatcgcaagggcaccaacctggcggcgcaggtcgagttcgaaagc
ttcaaccgccagttgaacgcggtcaaccgccacacctccagcaagctggtcaatgccgtg
caacaagacgtgcacgccatgctgcagcaggcggaaagcctggtggaagcgcaggcgcgc
cagcttatcgaacaggcgaagcaagaggcggacgacaagctgagcgcagagctggcgcgt
ctggaagcgctgaaggcggtcaacccgaacatccgcgacgacgaagtcgagacgctggag
ttcaaccgccgtcaggtgctggccaacctcaatgaagccggctggcgtctcgacgccatt
cgactggtggtggtcacccaccaataa
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