Serratia bockelmannii: ACSJLU_004212
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Entry
ACSJLU_004212 CDS
T11865
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sboc Serratia bockelmannii
Pathway
sboc00330
Arginine and proline metabolism
sboc00480
Glutathione metabolism
sboc01100
Metabolic pathways
sboc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sboc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ACSJLU_004212 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ACSJLU_004212 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ACSJLU_004212 (speF)
Enzymes [BR:
sboc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ACSJLU_004212 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XYK22150
LinkDB
All DBs
Position
complement(4427692..4429875)
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AA seq
727 aa
AA seq
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MKELKIATSASLVATIETLRQIVRVEQTDYTDVAAVVVSVADVDAGILARLQATGFDIPT
FVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTYV
EMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKDA
QKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDAHCFDERYLREQIREVAPEKAAAARPFRLAIIQLGTYDGTIYN
ARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAG
FSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGAAGRR
MWMDCVKLGIETRKQLLTRCSQLKPFIPLQVAGKDWQDYDTDLIANDARFFTFVPGETWH
GFEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSI
LFLLTPAENPAKMEQLVEMLAQFERYVAEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQEM
HDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALP
YPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIK
LTSPDIG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatcgcgaccagcgccagcctggtcgccaccattgagacgctgcgc
cagatcgtgcgcgtagagcagacggactacactgacgtggcggcggtggtggtgtcggtc
gccgacgtggacgccggcattctggcgcgcttgcaggcgacggggttcgatattccgacc
ttcgtggcggtggaaggggacgagcatctttccccggattatctgccgtttgtcagcggg
gtcttcgcgctgctggccggcgccagcaagccattctacatggcgcagctggaggccgcc
gccgacgcctacgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctacgtc
gagatggaaaactcgacctttgcgtgcccggggcatcagggcggagagttcttccgcaaa
cacccggccggtcggcagttcttcgatttctacggtgaaaccctgttccgttccgatatg
tgcaacgccgacgtcaagctgggcgatctgctgatccacgaaggatcggccaaggatgcg
caaaagcacgcggcgcgggtgttcaacgccgataaaacctacttcgtgctcaacggcacc
tcggcggccaacaaggtggtgaccaacgcgctgctgacccgtggcgatctggtgctgttc
gatcgcaacaaccacaaatccaaccaccacggggcgctgatccaggctggggccacgccg
gtctatctggaaaccgcccgcaacccgttcggctttatcggcggtatcgatgcgcactgc
ttcgatgaacgctacctgcgcgagcagatccgcgaagtggcgccggagaaagccgcagcg
gcacggccgttccggctggcgatcattcagctcggtacctacgacggcacgatttacaac
gctcgccaggtgatcgacaccatcggccacctgtgcgattacatcctgttcgactccgcc
tgggtgggctacgaaggctttattccgatgctgaaagagtgctcgccgctgctgctggag
ctggacgagcacgatccgggcatttttgtcacccagtcggtgcataaacagcaggcgggg
ttctcgcagacctcgcagatccacaagaaagacgaccatatcaaagggcagaagcgccac
tgcaaccataagcatctgaacaatgcgttcatgctgcatgcgtcgaccagcccgttctat
ccgctgttcgccgcgctggacgtcaacgccaagatgcatgccggcgccgccggacgtcgc
atgtggatggactgcgtcaagctgggcatcgagacgcgtaaacagctgctcacgcgctgc
tcgcagctgaagccgtttattccgctgcaggtggcgggcaaggactggcaggattacgat
accgatctgattgccaacgacgcgcgtttcttcaccttcgtaccgggggaaacgtggcac
ggcttcgaaggctatgcccaggatcagtatctggtggatccgtgcaagttgctgctgacc
acgccggggattgacgccgcgactggccaatacaccgagttcggcgtgccggccaccatt
ctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcgatc
ctgttcctgctgactccggcggaaaacccggccaagatggaacagctggtggagatgctg
gcgcagttcgagcgctatgttgcagaagacgcgccgctgagcgtggtgctgccaacggtg
taccgcaagaacgagcagcgctatcgtggctacagcattcgccggctgtgccaggagatg
cacgatctgtacgtcagcttcgacgtcaagcagctgcaaaaagagatgttccgccaggat
catttcccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgacaac
gtcgagctggtgccgatcggccaggcggaagggcgcatcgcggcggagggggccttgccg
tacccgccgggcgtgctgtgcgtggtgccgggcgaagtgtggggcggcgcggtgcagcgc
tatttcctggcgttggaagagggcatcaaccgcctgccgggcttctcgccggagctgcag
ggagtctacatcgagaaaaaagatcacggctggaagcgcatcttcggctatatgatcaag
ctgactagtcctgatataggttga
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