Candidatus Shikimatogenerans bostrichidophilus: NHG07_00340
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Entry
NHG07_00340 CDS
T10143
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbos Candidatus Shikimatogenerans bostrichidophilus
Brite
KEGG Orthology (KO) [BR:
sbos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbos03016
]
NHG07_00340 (truA)
Enzymes [BR:
sbos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NHG07_00340 (truA)
Transfer RNA biogenesis [BR:
sbos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NHG07_00340 (truA)
Prokaryotic type
NHG07_00340 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
WGH28154
LinkDB
All DBs
Position
47969..48718
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AA seq
249 aa
AA seq
DB search
MRFFLKLSYNGYYYNGWQKQLNNKLTIEEEIENKISIILKKKINIIGASRTDSGVHAKIM
FAHFDYKYNIKKKFFLFKINLLLSNNITINNIFKVKNNIHARFNVKYRIYKYILSYNKNP
FYKNLYWYFKKKKKLNIKLMNKAINIIIKRKNFYLFSKKEKKKINYICNIYYAFWKKKKN
YIFFFIKSNRFLRKMVRFIISICIEIGLKKINIYDLNKKIKNNNIKFNINVPPYGLYLNK
IKYNKKIFL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagattttttttaaaattatcttataatggatattattataatggatggcaaaaacaa
ttaaataataaattaactatagaagaagaaatagaaaataaaatttcaattattttaaaa
aaaaaaattaatataataggtgctagtagaactgatagtggagtacatgctaaaataatg
tttgctcattttgattataaatataatataaaaaaaaaattttttttatttaaaataaat
ttattattatcaaataatattacaattaataatatttttaaagttaaaaataatatacat
gctagatttaatgtaaaatatagaatatataaatatatattatcttataataaaaatcct
ttttataaaaatttatattggtattttaaaaaaaaaaaaaaattaaatataaaattaatg
aataaagctataaatattattattaaaagaaaaaatttttatttattttcaaagaaagaa
aaaaaaaaaataaattatatttgtaatatatattatgcattttggaaaaaaaaaaaaaat
tatatttttttttttattaaatcaaatagatttttaagaaaaatggtaagatttattatt
tctatttgtatagaaataggtttaaaaaaaattaatatatatgatttaaataaaaaaata
aaaaataataatattaaatttaatataaatgttccaccttatggtttatatttaaataaa
attaaatataacaaaaaaatttttttataa
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