Shewanella baltica OS223: Sbal223_0020
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Entry
Sbal223_0020 CDS
T00803
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sbp
Shewanella baltica OS223
Pathway
sbp00071
Fatty acid degradation
sbp00280
Valine, leucine and isoleucine degradation
sbp00310
Lysine degradation
sbp00362
Benzoate degradation
sbp00380
Tryptophan metabolism
sbp00410
beta-Alanine metabolism
sbp00640
Propanoate metabolism
sbp00650
Butanoate metabolism
sbp00907
Pinene, camphor and geraniol degradation
sbp00930
Caprolactam degradation
sbp01100
Metabolic pathways
sbp01110
Biosynthesis of secondary metabolites
sbp01120
Microbial metabolism in diverse environments
sbp01200
Carbon metabolism
sbp01212
Fatty acid metabolism
Module
sbp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sbal223_0020
00650 Butanoate metabolism
Sbal223_0020
09103 Lipid metabolism
00071 Fatty acid degradation
Sbal223_0020
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sbal223_0020
00310 Lysine degradation
Sbal223_0020
00380 Tryptophan metabolism
Sbal223_0020
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sbal223_0020
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sbal223_0020
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sbal223_0020
00930 Caprolactam degradation
Sbal223_0020
Enzymes [BR:
sbp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sbal223_0020
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sbal223_0020
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sbal223_0020
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Sbal223_0020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACK44564
UniProt:
B8E3R3
LinkDB
All DBs
Position
complement(22898..25048)
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AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTSS
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILTTDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALK
VGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNDQFVK
GKAKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKP
KKDVDPTSYGLLKDAFGELKAFEADDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRTLAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaaccctcgcctcgctcgat
gcggcattagacagcatcaagcaagattccaatatcaaagcgttagtgctgacctcaagt
aaagatacctttattgtgggcgccgacattaccgaatttttaggcctgttcgcacaagat
gacgccgtattgctctcttgggttgaacaagccaacgcagtcttcaacaaactcgaagac
ttgcctttcccaactgcatcagcaatcaaaggctttgccttaggtggcggctgtgaaacc
attctgacaaccgatttccgtatcgcagacaccacagccaaaatcggtttacctgaaact
aaactcggcatcatcccaggttttggcggcacagttcgtctgccacgtgtgattggtgca
gataacgcacttgagtggatcaccacaggtaaagaccaacgcgctgaagatgcactgaaa
gtcggcgctgttgatgccgtggttgcaccacaagcgttagaagctgctgcgattcaaatg
ctgaaagatgctgttgctgaaaagctggattggcaagcacgtcgtaaccgtaaactgtct
gcactaacactgccaaaacttgaagctatgatgtcattcaccacagccaaaggcatggtg
tttgcggttgcgggtaaacactaccctgcaccaatggctgctgtaagcgtgattgagcaa
gcatcgactaaaggtcgtgctgaagcattacaaatcgaacatcaagcctttatcaagctg
gctaaaactgacgttgctaaggcacttatcggtattttccttaacgatcaattcgttaaa
ggtaaagcgaagaaagctggcaagttagcgaaagaagtcaacaacgcggccgtattaggt
gcaggcattatgggcggcggcatcgcttaccaaagcgccagcaaaggcacaccgattgtc
atgaaagacattgcccagccagcattagatttaggcctcaatgaagccgctaaactgctg
tctgcccaagtcgcccgtggccgttcaacgccagaaaaaatggccaaagtgctgaacaac
attacgccttcgttagattatgccgcgattaaacacagtgatgttgtcgttgaagccgtt
gttgaacatccaaaaatcaaagcacaggttttagccgaagttgaaggttatgtgagtgaa
gatgcaattatcgcctcaaacacttcaacgatttcaatcaacttgctcgctaagagcatg
aagaaaccagagcgtttctgcggtatgcatttcttcaacccagtgcacaaaatgcctttg
gtcgaagtgatccgtggcgagcacagctctgaagaaaccatcgcctctgttgtggcttat
gccagcaaaatgggtaagaccccaatcgttgttaatgattgcccaggcttcttcgttaac
cgcgtactcttcccttactttgcaggctttaacggcttacttgccgaaggtggcgacttt
gctgcaatagacaaagtgatggaaaaacaattcggttggccaatgggtccagcttacctg
ctcgacgtagtcggtttagacacaggtcatcacgcccaagctgtaatggctgaaggtttc
cctgatcgcatgggtaaatctggtactgacgcgattgatgtgatgtttgagaacaaacgt
cttggccagaaaaatggcaaaggtttctatgtctattccgtcgatagccgtggcaagccg
aagaaagatgtcgatccaacaagctacggtctattgaaagatgcctttggcgagttaaaa
gccttcgaagccgatgacattattgcccgtactatgatccctatgatcattgaaaccgtg
cgctgtttagaagaaggtattgtcgcatcgcctgccgaagcggatatgggcctagtttat
ggcttaggattcccgccattcagaggcggcgtgttccgttacttggataccatgggtgtc
gcaaactttgtggccttagcagacaaatacgctcacttgggcggtctgtatcaagtcaca
gatgcgatgcgcacattagcagccaataacggtagctactaccaagcctaa
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