Shewanella baltica OS223: Sbal223_0077
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Entry
Sbal223_0077 CDS
T00803
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbp
Shewanella baltica OS223
Pathway
sbp00061
Fatty acid biosynthesis
sbp00071
Fatty acid degradation
sbp01100
Metabolic pathways
sbp01212
Fatty acid metabolism
sbp02024
Quorum sensing
sbp04146
Peroxisome
Module
sbp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sbal223_0077
00071 Fatty acid degradation
Sbal223_0077
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sbal223_0077
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sbal223_0077
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbp01004
]
Sbal223_0077
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbp04147
]
Sbal223_0077
Enzymes [BR:
sbp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sbal223_0077
Lipid biosynthesis proteins [BR:
sbp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sbal223_0077
Exosome [BR:
sbp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sbal223_0077
Exosomal proteins of breast cancer cells
Sbal223_0077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
ACK44621
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All DBs
Position
90010..91815
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AA seq
601 aa
AA seq
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MSLDQYHVIRLLQQQSESLKDAIALEGFEMAAPWYQVSWQAFDQISSKIAQVLIELGVQV
QDRCVILAQNCPQWTCADVGTLKSRAVVVPIYPTSTVEQASFIVNDAAAKVIFVDDAKQY
AMACELQSLCPSLEHVIVFDASVALAADKAEQHWHLDALLAGDAKAIKQEVELNQRLQAA
NLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFHSGDVSLAFLPLSHVFERS
WSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSADGRKK
LFAWAMRVGQRQFEVGQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAALD
VNVGSFFHAINIPVLCGYGMTETNATVTCNTLGNRVPGSNGQPLLETEIKLGKDDEILVR
GATVMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQR
VEGAVGCCPFIEQVAIIADARNYVTALIVPAFESLEAWAKDKGLKYESPLELLRHSHVVE
HFEQRLKQLQHELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYN
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatcaatatcatgttattcgactattacagcagcagagcgagtctttaaaa
gacgcgatagcgctggaaggttttgaaatggccgctccttggtatcaggtgagctggcaa
gcctttgaccaaattagcagtaaaattgcacaagtgttgatcgaacttggcgtacaagtg
caagaccgttgcgttattttggcgcaaaactgcccacagtggacctgtgccgatgtcggg
acgcttaaaagtcgcgccgttgtggtgccgatttaccccaccagtaccgtcgagcaggcg
agctttatcgttaacgatgcggcggcgaaagtcatttttgtcgacgatgctaaacaatac
gctatggcctgcgagcttcaaagcttatgcccaagtcttgagcatgtgattgtttttgat
gccagcgtggcacttgccgctgacaaagctgagcagcattggcatttagatgcgctgcta
gcgggcgatgcaaaagcgattaagcaagaagttgagcttaaccagcgtttacaagcggcc
aatcttgatgatttactgacccttatttatacctctggcaccacgggcgatcctaaaggc
gtgatgctggattaccgcaatatggcctcgaccatacgtcaacacgatcaaaaactggct
ttccattctggcgatgtgtctttggcattcttgcccttgagccatgtctttgaacgcagt
tggagtttttacgttttgtgccgtggcggtcataacgtctatttgcaaaatacccaaaga
gtgaaagaggcgattagcgccgtgcgtccgcacaccttgtgtgtggtgccgcgtttcctc
gaaaaagtgtacagcgccgtacaagataaagtcgccaagtcagccgatggccgtaagaag
ttgtttgcttgggcgatgcgtgttggtcaacgccagttcgaagtcggccaaggtcgtgct
aagggcggattatggttgtcgctgcaatggcgtttggcccacaaacttgtgtatagcaag
ctgcaagccgtgcttggcgggcgtttgaagtttatgccctgcggtggcgcggcattagat
gtgaatgtcggtagtttcttccatgcgattaatattcctgtgctgtgtggttacggcatg
acggaaaccaacgcaactgtgacctgcaataccttaggtaatcgagtgccaggttctaat
ggtcaacctctgctggaaaccgaaatcaagctaggcaaggacgatgagattttagtccgc
ggcgcgactgtgatgcgtggctattacaatcgaccagaagataccgccgccgccttcgaa
gacggttggttaaaaaccggtgatgcgggacgtttcgatgcgaacggtaacttatttatt
accgaccgtatcaaagagttaatgaaaacctctaacggaaaatatatcgcgccacaacgg
gttgagggtgcagtgggctgttgtccttttatcgagcaagtggcgattattgccgatgcg
cgtaactatgtgaccgccttgattgtgccagcgtttgagtcactggaagcgtgggcgaag
gacaaagggctgaagtatgagtcgcctttagaattgctacgccatagtcatgtggtggaa
cattttgaacaacgtctcaagcagttgcagcatgaattggcgggttttgaacagatcaaa
aagttcacactgttgccagaagccttctcgatggaagcgggtttaatcaccccaacgctc
aagttgcgccgcaagatgatttatcataaatacgcccacgaaattaatgctatgtacaac
agctga
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