Shewanella baltica OS223: Sbal223_0585
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Entry
Sbal223_0585 CDS
T00803
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
sbp
Shewanella baltica OS223
Pathway
sbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal223_0585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbp03400
]
Sbal223_0585
DNA repair and recombination proteins [BR:
sbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal223_0585
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal223_0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_25
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_21
nSTAND3
NACHT
Viral_helicase1
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ACK45119
LinkDB
All DBs
Position
complement(670771..673653)
Genome browser
AA seq
960 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGEPRC
PTHNQPLAAQTVSQMVDKVLEMPQDSRLMLLAPVVNARKGEHVKLLEGLSAQGYIRARID
GEVCDLTDPPTLDLHVKHTIEVVVDRFKVRDDIKQRLAESFETALELSGGIATVATMDDD
TGTGKAKGEELIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERV
ISNTELSLAGGAIRGWDRRNFYYFQMLSSLAEHYKFDVEVPYEQLSEKVRKIVLYGSGKD
SIAFKYINDRGDVVVRNHPFEGILNNMDRRYRETESNSVRDELAKFINTQACQSCGGSRL
REEARNVFLGDINLPQLTTWSIGEALDYFEKVEFSGQKAQIAEKILKEIRDRLGFLVNVG
LNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHL
RDLGNTVIVVEHDEDAIRMADHVIDIGPGAGVHGGEVICDGPIEKIIACEESVTGQYISG
KRCIHIDTPRIPFDKTQVIELFGARGNNLRNVDLTIPIGLFTCVTGVSGSGKSTLINDTF
FKIAHRMLNGATVDEPSPYDRIEGMELCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREI
FAGTQESRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRE
TLEVRYKGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGE
AQRVKLAKELSKRDTGQTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDV
IKTADWIIDLGPEGGGGGGMILATGTPEEVAEHPTSHTARFLKPLLKRDIEMAKANKAKA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaaatacgcggcgcacgcacccacaatctcaagaatatcaacctgact
atcccaagggataaactgattgtcatcacgggcttatcgggatctggcaaatcctccctt
gctttcgatactttatatgccgagggccagcgacgttacgtcgagtccctgtcagcctat
gctcgccaatttttgagtttgatggaaaagcccgatgtggaccatattgaaggcttaagc
ccagcgatatccatagagcaaaaatccacttcccataacccgcgttccaccgtgggcact
attaccgaaatttacgattacctgcgcttgatgtttgcccgcgtgggtgagccgcgttgt
ccgacacacaatcaacctttggcggcgcaaaccgtcagccagatggtcgataaagtgtta
gaaatgccccaagacagccgcttaatgctgctcgcgcctgtggtcaacgcccgtaagggt
gaacacgttaaattgctcgaaggtctatcggcgcagggttatatccgtgcgcgtatcgac
ggtgaagtgtgtgatttaaccgatccgccaaccttagatttacacgttaagcacacgatt
gaagtggtcgtcgaccgttttaaagtgcgtgacgatatcaagcaacgcttagcggaatcc
ttcgaaaccgcactggaactctccggcggcatcgcgaccgtcgccaccatggatgacgac
acaggtactggtaaagcaaaaggcgaagaactgatcttctctgccaacttcgcctgtccg
cattgcggttattcgatggcggaattagagccaaggatcttctcctttaacaatccagcc
ggcgcgtgccaaacctgtgatggtttaggggtacaacaatttttcgatcctgaacgcgtg
atcagcaacactgagctgtcactggctggcggcgcgattcgcggctgggatagacgcaac
ttctactatttccaaatgctcagctcactcgccgaacactataagttcgatgtcgaagtg
ccctacgagcagctcagcgaaaaagtccgcaaaatcgtcctatacggatcaggcaaagat
agcattgcctttaagtacatcaacgatcgcggcgatgtggtggtgcgtaatcaccccttc
gaaggcattctcaacaacatggacaggcgctatcgcgaaaccgaaagcaactcggtacgt
gacgaattagccaagtttatcaatacccaagcctgccaaagctgtggtggttcgcgtctg
cgcgaagaagcccgtaacgtgtttttaggcgatatcaatctgccgcaactcaccacttgg
tcgattggcgaagccttagattacttcgaaaaagtcgagtttagtggccaaaaagcgcag
atcgccgagaagattttaaaagaaatccgcgatcgcttaggtttcctcgtgaacgtgggc
ctcaattatttgagcctatcacgctcggcggaaaccctctcgggcggtgaagcccaacga
attcgactcgccagccaaattggtgccggacttgtcggcgtgatgtatgtgctcgacgaa
ccttcaatcggcctgcatcaaagggataacgaacgtctgctgcaaaccctgatccacctg
cgggatttgggcaacacagtaattgtggttgagcacgatgaagatgcgatccgcatggcg
gatcacgtgatcgacatcggccctggcgcaggtgttcatggcggcgaagtgatttgcgac
ggcccgattgagaaaatcatcgcctgtgaagagtcagttaccggacaatatatttccggt
aagcgctgcattcatatcgatacgccgcgtattccgttcgacaaaactcaagtgattgag
ttgtttggcgcgcgcggcaacaacctgcgcaatgtggatttaaccataccgattggcctc
ttcacttgtgtaacgggcgtatcgggttcaggtaaatcgaccttaatcaacgataccttc
ttcaagatcgcccatagaatgctaaacggggcgactgtggatgagccatcaccctatgat
cgtatcgaagggatggagctgtgcgacaaagtagtcgatattgaccaaagcccgattggc
cgcacaccgcgctctaaccctgccacttatactggcatcttcaccccaattcgcgagatt
tttgccggaacccaagagtcacgtactcgcggttatcaagtcggccgcttctcctttaac
gttaaaggtggccgctgtgaggcttgccaaggcgacggcttgatcaaggtcgaaatgcac
ttcctgcccgatgtgtatgtaccctgcgattcctgtaaaggtaagcgctataaccgcgaa
accttagaagtacgctataaaggcaagaatattcacgaagtactgcagatgacagtggaa
gatgcgcgcactttcttcgatgccgtacctgccattgcccgtaagctgcaaactttgatg
gatgtgggtttgtcctatgtgcgcctcggccaaagtgcgaccacactgtcgggcggcgaa
gcccaaagggtgaaacttgccaaagagctgtctaagcgtgacacgggccaaaccttgtat
atcttggatgaaccgaccacgggcttacactttgccgatatccaattgctgctcgatgta
ttgcatcgtcttaaatcccacggcaacactattgtggtcattgagcataatctggacgtg
atcaaaacagcggactggattatcgacttaggcccagaaggcggcggtggcggcggtatg
attttagccacaggcacgccggaagaagtcgccgagcatccaacctcccacacagcacgc
ttcttaaagccactgctaaaacgggatattgaaatggcaaaggccaataaagccaaggca
taa
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