Shewanella baltica OS223: Sbal223_1133
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Entry
Sbal223_1133 CDS
T00803
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbp
Shewanella baltica OS223
Pathway
sbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal223_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbp03019
]
Sbal223_1133
03016 Transfer RNA biogenesis [BR:
sbp03016
]
Sbal223_1133
Enzymes [BR:
sbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Sbal223_1133
Messenger RNA biogenesis [BR:
sbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sbal223_1133
Transfer RNA biogenesis [BR:
sbp03016
]
Prokaryotic type
tRNA degradation factors
Sbal223_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
ACK45648
UniProt:
B8E6N7
LinkDB
All DBs
Position
1332530..1334629
Genome browser
AA seq
699 aa
AA seq
DB search
MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKEADAGRDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPNGFKNEVQVIITVVSVD
PQIEPDIISMIGTSAALAISGIPFSGPLGAARVGYIDGEYVLNPSVAQLATSQLNLVVAG
TAGAVLMVESEAQALPEEVMLGSVVYGHDQQQVVIKAIAEFKAEAGKPTWDWTAPTQDAD
LVAQIKELAEAGLGDAYKIQVKQDRYAQVSVVKAATKEALLASNPSIDLREVDNLLGSLE
KKVVRGRIIRGEPRIDGREPDMIRALSVLAGVLPRTHGSALFTRGETQALVTCTLGTERD
AQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPSAAEF
PYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDI
LGDEDHLGDMDFKVAGTRDGITALQMDIKIEGITKEIMDIALQQAYGARVHILNVMDQAI
GSHRDDISDHAPRITVIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVKIASSN
GEATKEAIRRIEEITSEVEVGRIYNGKVIRIVDFGAFVNILPGKDGLVHISQISDERVAN
VSDHLELNQEVAVKVMEVDRQGRVRLSIKEAQTKETAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagagttttgagtatggtcaacatacagtcaccctggaaacaggt
gttatagcgcgtcaagcagatgcagccgttttagcgagtatgggtgacacgactgtgttg
gtcactgttgtcggtaaaaaagaagcagatgcaggtcgtgactttttccctctgactgtt
aactatcaagaaaaaacctacgcagcgggtaaaattcctggtggtttctttaagcgtgaa
ggccgtccttcagaagatgagacattaatcgctcgtctgatcgaccgtccaattcgccct
cttttccctaatggtttcaaaaacgaagttcaagttatcattactgtagtatctgtcgat
ccacaaatcgagccagatatcatctctatgattggtacttctgcggcactggctatttct
ggtattccattcagcggtcctttaggggctgcacgtgtgggttacattgatggcgaatac
gtgttgaacccaagtgttgcgcaacttgcaaccagccaactgaacttagtggttgctggt
actgctggtgcagtattaatggtggaatcagaagcccaagcattgccagaagaagtgatg
ttaggttctgttgtttacggtcacgatcaacaacaagtggttatcaaagcgattgctgaa
tttaaagcagaagccggtaaaccaacttgggattggactgcaccaacgcaagatgccgat
ttagttgcccaaatcaaagagcttgctgaagctggtttaggcgatgcgtataaaatccaa
gttaaacaagatcgttatgctcaagtttctgttgttaaagcagcaacaaaagaagccttg
ttagccagcaatccaagcattgatttacgtgaagtagacaacttgctgggtagcttagag
aagaaagtggttcgtggtcgcatcatccgtggtgagccacgtatcgatggtcgtgaacca
gacatgatccgtgcattaagcgtgttagcgggcgtattgccacgtactcacggtagcgca
ttgttcactcgcggtgaaactcaagcgttagtgacttgtactttaggcactgaacgtgat
gcacagaagattgacagcatcatgggcgagcgcactaaccgtttcatgctgcactataac
ttccctccatactctgttggtgaaacaggcatggtgggttcacctaagcgccgcgaaatc
ggtcatggtaagttagcatggcgcggtatcaatgctgttatgccttcagctgctgaattc
ccatacagcgtgcgcgttgtatctgaaatcactgaatctaacggttcaagctctatggcg
tcagtatgtggtacttcattagctctgatggatgctggtgtgcctatcaaaacttctgta
gcgggtatagctatgggtctagtgaaagaaggcgatgatttcgttgttctttctgacatc
ttaggtgatgaagatcatttaggtgacatggactttaaagttgcgggtacgcgtgatggt
attactgcactgcagatggatatcaagatcgaaggtatcactaaagaaatcatggatatc
gcactgcaacaagcctatggcgcacgtgtacatatcctgaacgtgatggatcaagcgatt
ggttcacaccgtgacgatatttctgatcacgctccacgtatcactgttatcaagatcaac
ccagaaaaaatccgtgacgttatcggtaaaggcggcgcagttatccgtgctcttactgaa
gaaaccggcactacgattgaactggaagatgacggtactgtgaagatcgcttcttcaaac
ggcgaagcaaccaaagaagctatccgtcgtatcgaagaaatcacttcagaagttgaagtg
ggtcgtatctacaacggtaaagttatccgtatcgttgatttcggtgcgttcgtgaacatt
ctgccaggcaaagacggtttagtacacatttcacaaatcagtgatgagcgtgttgctaac
gtgtctgatcaccttgaattgaaccaagaagttgctgttaaagtaatggaagtggatcgt
caaggccgcgtacgtctgtcaattaaagaagcacaaactaaagaaactgctgctgaataa
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