Shewanella baltica OS223: Sbal223_3421
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Entry
Sbal223_3421 CDS
T00803
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sbp
Shewanella baltica OS223
Pathway
sbp00630
Glyoxylate and dicarboxylate metabolism
sbp00680
Methane metabolism
sbp01100
Metabolic pathways
sbp01120
Microbial metabolism in diverse environments
sbp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sbp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sbal223_3421
09102 Energy metabolism
00680 Methane metabolism
Sbal223_3421
Enzymes [BR:
sbp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Sbal223_3421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer2_4
DAO
Fer4
HI0933_like
Fer4_6
Fer4_8
FAD_oxidored
Thi4
NAD_binding_7
FAD_binding_3
GIDA
FAD_binding_2
Fer4_2
AlaDh_PNT_C
Amino_oxidase
Fer4_18
Fer4_10
Fer4_9
MurD-like_N
Shikimate_DH
2-Hacid_dh_C
Fer4_21
Lys_Orn_oxgnase
Fer4_16
Fer4_15
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
ACK47905
UniProt:
B8E5Q2
LinkDB
All DBs
Position
4063515..4067792
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AA seq
1425 aa
AA seq
DB search
MIELRIDDQVLSVNSTDNLLQAAHAAGIAIPSLCDPSAASQQLGTHAHTHAQADKQACNL
CVVQIENADASLRCVRACETLVAAGMRVITQSEWLSQQRKQALTAILSDHFADCEAPCQQ
ACPAGVDVQSYLYHIAQGNHTEAVKVIKQTLPLPLSIGRVCPAFCEAQCRRGLVDEPIAI
RQLKRHAADLDLADGEKGGTSYVPPRQPDTGKKVAIIGAGPAGLSAGYYLSNQGHSVEIF
ESMPQAGGWLRYGIPEYRLPKAILDKEIALLCHNGLTIHTETRLGHEVHLNQLVEDFDAV
CLAIGAQKAVPMDYPGSTLKGCYLGVDYLKDHCLDQTFILGKKVAVIGGGNTAIDCARTA
VREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDTQGRVHAVTFAKM
ALGEADASGRRAPVDTGETFTQDFDTVIAAVSQTPDMSFMQDPASPLSQGTLALSRWNTF
IGCEHTMSSGVEKLFVVGDARRGPATAVAAIGDGHKAAIAIDKLLKQGLSCDLHANAFNS
AKAISKAVTQNLPATDLYPAVPRKARLSMPELSAMQRLLNYGEVELGFAPDAAMQEAARC
LECACQANTDCKLRDYATDYHVEPKSLSTQSARKFSVDKSSPFIQFDANRCISCGKCVDV
CQLQSGHCAIQFAHDSYQALPQDLSETIERRAPRVGFSASMADSKCVQCGNCVQVCPTGA
LVDARDKRQGDETPLKTASTICTYCGVGCRLDLKIDASTNQIRHIEGNKESVVNQGMLCV
KGRFGFDFLHSEKRLTTPLIRKDGQLTPSSWPEAIAYVAEHLQQIKQQHGSNALASLASA
KATNEENFLLQKFVRSILGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIQASDVI
FIIGSDTSSAHPIIASKIKQAVALHGAKLMVADPKRVAIADSAHLYVAHRPGTDVMLLNA
IMAEIIRNDWQDKSYIAARTEGVNALYAELAKADYSLENAALITGVKAEDIACIARTIGT
AEKTAIYYAMGITQHTTGHDNVTAISNLQLLCGNIGVEGAGINPLRGQSNVQGACDMGAL
PNFFSGYQKVTDIHARMRFEAHWQTPLSAEIGVTATHMMHDISKGYIKALYVMGENPVLS
DPDQAHVLRALNAIDFLVVQDIFLTETAELADVVLPAAAFVEKRGHFTNTERRVQRLEQA
LLPPGEALPDWQIVQAIANAMGAAWDYPNEEAIWQEINELTPQYRGITWQRLSTGDDGKI
PQGIQWPCPDATHPGTPIMHQGQFTRGLGKFTPVSYRLPAEMPCSEYPLTLSTGRLLEQF
HTGTLTRKTAGLDLLGSPKVMISVYDAEQLGIGNGDKIKLTTRRGEIEIDAFVTKRAQAG
VLFLPFHFVEAAANKLTINALDPVAFIPEYKVCSVRVERVAEKID
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaattgatgaccaagtgttatcggttaactcgaccgataacctactg
caagcggcacatgccgcgggcatagccatacccagcttatgtgatcccagcgcagcctcg
cagcaattaggcactcatgcacacactcacgcacaagcagacaagcaagcctgcaatttg
tgtgtcgtccaaattgaaaatgccgatgccagtttgcgctgcgtacgcgcctgcgaaacg
ctggtcgcagcgggcatgcgggtgataactcagtccgaatggttaagtcaacagcgcaaa
caagcactgacagcgatcttgagcgatcacttcgccgattgtgaagccccctgccaacag
gcatgccctgcgggcgtcgatgtgcagagttacctgtatcacatcgcccaaggcaaccat
accgaagccgttaaagtcattaaacaaaccttgccactgccgctatctattggccgagtt
tgccccgctttttgtgaggcacaatgtcgccgtgggctagtcgatgagcccatcgctatt
cgtcaattaaaacgccacgccgctgatctcgatctcgccgatggcgaaaagggcggcacg
agttatgtgccgccacgccaacccgacacgggcaaaaaagtcgcgattattggagcgggc
ccagcaggattaagtgcaggatattacttatcaaaccaaggccatagtgttgagatattc
gaatctatgccacaggctggtggctggctgcgctatggtattcctgagtatcgtttacct
aaggcgatactcgataaagaaatcgcactcttgtgccataacggcttaaccatacacaca
gaaacacgtctcggccatgaggtgcatttaaatcaattagttgaagatttcgatgccgtc
tgtcttgcgatcggcgcccaaaaagccgtgcctatggattatcccggcagcacgctcaaa
ggttgttacttaggcgttgattatttaaaagatcattgcctagaccagacatttatccta
ggcaaaaaagtcgccgtcattggtggcggcaatactgctatcgattgcgcccgcactgcg
gtgcgtgaaggctgcgatgtcaccttaatttaccgccgcacccgcgcagaaatgcccgcc
gaagcttacgaagtacacgaggccgaagtcgaaggggtgaaatttcatttcttaaccaac
ccaattgaaaaccatagcgatacgcaaggcagagtccacgccgtcacctttgccaaaatg
gcgctcggcgaagccgatgcctcgggcagacgcgctcccgttgatactggtgaaaccttt
acccaagattttgatactgtgatagccgcagtatcgcaaactcccgatatgagttttatg
caagatcccgccagtcctttaagccaaggcacacttgccctcagccgctggaataccttc
attggctgcgagcacactatgtcatccggggttgaaaagctctttgtggtgggcgatgcg
cgccgcggtcctgccaccgcagttgccgccataggtgatggccataaagccgccatcgcc
atagataaattactcaaacaaggcctaagttgcgatctgcatgccaatgcatttaattcc
gctaaagccatcagcaaagcggtgacacaaaacttgcccgcaaccgatctttatcccgcc
gtaccgcgtaaagcccgtttaagtatgcccgagctgagtgcgatgcagcgtttactcaat
tacggcgaagtcgagctaggctttgctcccgatgccgcgatgcaagaagcggcgcgatgc
cttgaatgcgcctgccaagccaatactgattgtaaattaagggactatgcgaccgactac
catgtcgaacctaagtcactcagcacccaaagcgcgcgtaagttttcggtcgataaatcg
agtccgttcattcaatttgatgcgaatcgctgcattagctgcggtaagtgcgttgatgtg
tgccagttgcagagtggccattgtgcgattcaatttgcccatgattcctatcaagcactg
ccgcaagacctaagcgaaaccatcgaacgccgcgcaccgagagtcggctttagcgccagc
atggccgacagcaaatgtgtgcaatgcggtaactgtgtgcaggtttgcccaacgggcgcg
ctcgtcgatgcgcgggataaacgccaaggcgatgaaacgccactcaaaaccgcctcaacg
atttgtacctattgcggcgtaggctgtcggcttgaccttaaaattgatgccagcactaat
cagatccgtcatatcgagggcaacaaagagtctgtggttaaccaaggcatgctctgtgtc
aaagggcgatttggcttcgattttcttcacagtgaaaaacgcctcaccacgccactcatt
cgtaaagatggtcagctcacgccaagtagttggcctgaagccatcgcctatgtagccgaa
catttacagcaaataaaacagcaacatggcagtaatgcactggcaagcttggcctcggca
aaagccaccaatgaagaaaacttcctgctgcaaaaatttgtcagaagcatactcggcacc
aataacatcgaccactgcgcccgtctgtgtcattcatctacggtaacaggcctgcagcag
agtattggtagtggcgctatgaccaatgacattccgagcattcaagcatcggatgtaatt
tttatcataggctcagacaccagcagtgctcacccgatcatcgcctcgaaaatcaaacaa
gccgtggctttgcatggtgcaaaattaatggtggccgatcctaaacgtgtcgccattgcc
gacagtgcacacctttatgtcgcccacagacccggcactgacgtcatgttactcaatgcg
attatggcggaaatcatccgcaacgactggcaggataaaagctacatcgccgcgcgcacc
gaaggcgtgaatgccctctacgctgaactcgcaaaagcagattacagcctagaaaacgcg
gccttgataaccggcgttaaagccgaagatatcgcctgtatcgcccgcaccataggcacg
gccgaaaaaaccgcaatctactatgctatgggcattacccagcacacgacgggacacgac
aatgtcactgccatatccaatctacaacttctgtgcggcaatattggggttgagggtgcg
gggattaacccactgcggggacaaagtaatgtgcaaggtgcctgcgacatgggcgcactg
cctaacttcttcagtggctaccaaaaagtcaccgacattcatgccagaatgcgtttcgag
gcacattggcaaacgccgttatcggcggagattggcgtaaccgcaacccacatgatgcat
gatatttccaaagggtacattaaagctttgtatgtgatgggcgaaaaccccgtattgagc
gatcctgaccaagcccatgtgcttagggcccttaacgctatcgactttttagtggtgcag
gacatcttcctcaccgaaaccgccgagcttgccgatgtggttctgcccgccgccgcgttt
gtcgaaaaacgcggtcatttcactaatacagaacggcgagtgcagcgactcgaacaggcc
cttttaccgccaggcgaagccctgccagattggcaaattgtccaagccattgccaatgcg
atgggcgccgcttgggattaccccaatgaagaagcgatttggcaggaaatcaatgagcta
acaccacaatatcgtggtattacttggcagcgattaagcactggagatgatggcaaaatt
ccccaaggcattcaatggccttgtccagatgcaacccatccaggaacgcccatcatgcac
caaggtcaattcacccgcggcttaggcaagtttacgcctgtgagttatcgcttacctgcg
gaaatgccctgcagtgagtacccgctcaccctctcaaccggacgtttactggaacagttc
cacacaggcaccttaacccgtaaaacagcggggctcgacttactcggctcgcctaaagtg
atgatttcagtctatgacgctgagcaactcgggataggcaatggcgataaaatcaaactc
actacccgtcgcggcgaaattgaaatcgacgcctttgtgacgaaaagagcccaagctggc
gtgctattcctgcccttccattttgttgaggctgctgcgaataaactcaccatcaatgcg
ctcgatcctgtggcctttatcccagaatataaggtctgctcggtgagggtagaacgggtt
gccgagaagattgattaa
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