Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101027611
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Entry
101027611 CDS
T04350
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X5
KO
K25392
girdin
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbq03037
]
101027611 (CCDC88A)
Cilium and associated proteins [BR:
sbq03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101027611 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
101027611
NCBI-ProteinID:
XP_003922776
UniProt:
A0A2K6SET1
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLE
SQRVNKKVNNDASLRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
TTMDSVEGNASKVLKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKTEFEKRQIKKELELYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASIKM
AQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGICKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQNTSLMNQNAQLLIQQSSLENENE
SVIKDREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHRDLED
RYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSTMNDLVQSMVLAGQWTGSTENLEVPDDISTGKRRKELG
AMAFSTTAINFSTVNSSSGFRSKQLVNNKDTTSFEDISPQGVSDDSSTGSRVHASRPASL
DSDRTSTSNSNNNASLHEVKAGAVNNQSRPQSHSSGEFSLLHDHEAWSSSGSSPIQYLKR
QTRSSPVLQHKIPETLESRHHKIKTGSPGSEVVTLQQFLEESNKLTSIQIKSSSQENLLD
EVMKSLSVSSDFLGKDKPVSCGLARSVSGKTPGDFYDRRTTKPEFLRPSPRKTEETYFIS
SAGKPTPGTQGKIKLVKESSLSRQSKDSNPYATLPRASSVISTAEGTTRRTSIHDFLTKD
SRPPVSVDSPPAAADSNTTAASNVDKVQESRNSKIRSREQQSS
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatttttactcctcttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaaccttgatgaatatgtg
gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaattggag
agtcagagagtaaacaaaaaagtcaataatgatgcctcccttagaatgcataatctatcc
attttggtgagacagataaaattttactaccaggagactttgcagcaattaatcatgatg
tcgttgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaaactgcttttacttttattgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaagtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaactcataatcaggaaaatgtgtttgacctgcaatggatggaagtgactgat
atgtcgcaggaggacatagaaccactcttgaaaaatatggcattgcatctaaaaagactt
atagatgagagagatgaacattcagagactatcatagaactctctgaagagcgggatggt
cttcattttctaccccatgcctcttcatctgcacaatcaccttgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcagtggaactggcagatgctaaagccaagata
agaaggcttaggcaggaattggaggaaaagactgaacaattgttggattgtaaacaagaa
cttgagcaaatggaaatagaactcaaaaggctgcaacaagagaacatgaatttactttcg
gatgctcgctctgccagaatgtaccgagatgaattagatgcacttcgagagaaagcaatc
agagttgataagcttgaaagtgaagtcagcagatataaagagagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagaccaactagaaggaactcgtgctcgttctgataaattacatgaattg
gaaaaagagaacttacaactaaaagctaaacttcatgatatggaaatggaacgagatatg
gatagaaaaaaaattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagctggaacagatatccagaactagt
gaactttctgaagcaccacagaaatccctgggccatgaggtgaatgagttaacctcaagt
agattattgaagctagagatggaaaaccaaagtttgacaaaaactgtagaagagcttcgg
actactatggattctgtagaaggcaacgcttccaaagtcctaaaaatcgaaaaagaaaat
cagagactcagtaaaaaggttgaaattcttgaaaacgagattattcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaagagaaagctcagcttgaaaaa
acaattgaaacactgagagaaaattcagagagacagattaagatattggaacaggaaaat
gaacatctgaatcaaacagtgtcttccttaaggcagcggtcccagataagtgcagaagca
agagtgaaagacattgaaaaagaaaacaaaattctccatgaatctatcaaagaaacaagt
agcaagctaagcaagactgaatttgaaaaaagacaaattaaaaaagaattggaactttat
aaagaaaaaggagaaagagcagaagaacttgaaaatgaattgcatcatcttgaaaaagaa
aatgaattgttacagaaaaaaataactaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaatagaaaatttaaaaaaacattggat
agctttaaaaacctgacctttcagttagaatccctagaaaaggagaattcccaacttgat
gaggaaaacttagaactgcgaaggaatgtagaatctttgaagtgtgcaagcatcaaaatg
gctcagctacagctagaaaacaaagaactggaaagtgaaaaagagcaacttaagaaaggt
ttggagctcctgaaagcatctttcaagaaaacagaacgcttagaagttagctaccagggt
ttagatatagaaaatcaaagactgcaaaaagctttagagaacagcaataaaaaaatccag
caattagaaagtgaattacaagacttagagatggaaaatcaaacattgcagaaaaaccta
gaagaactaaaaatatctagcaaaagactagaacagctggaaaaagaaaataaatcatta
gagcaagagacttctcaattggaaaaggataagaaacaattggagaaggaaaataagaga
cttcgacaacaagcagaaattaaagataccacattagaagaaaataatgtgaagattgga
aatttggaaaaagaaaacaaaaccctatccaaagaaattggtatatgtaaagaatcttgt
atccgtctaaaagaattagaaaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaacgttggttacgctacgtgaggatttggtgagtgaaaaattgaagacccagcag
atgaacaatgatctcgaaaaattaactcatgagcttgagaagatagggttaaataaggag
cgactcttacatgatgagcaaagtactgatgacagtaggtataaacttttggaatcaaaa
ttagaatccactcttaagaagtctcttgaaataaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacgaattataaccagcagttgcgccaagaacttaaaacagtg
aaaaaaaattatgaagctctcaaacagagacaggatgaggaaaggatggtacagagttct
cctccaacatctggtgaagacaacaaatgggaacgagaaagtcaagaaacgactagagaa
cttctgaaagttaaagacagattaattgaagtagaaagaaataatgctacattgcaagca
gagaagcaagcattgaaaactcaactgaagcagcttgagacacagaacaataatttgcag
gctcagattcttgcacttcagaggcagacagtgtcattacaggaacagaatactactctt
caaacacaaaatgcgaagcttcaggttgaaaattccacccttaattcccaaaatacctca
cttatgaaccagaatgcgcaactcctaatccagcagtcttccttagaaaatgaaaatgaa
tctgtaatcaaagatagagaagacctaaaatctctctatgattctctgataaaagatcat
gaaaaactggaacttcttcatgaacgacaggcttctgagtatgaatctcttatctctaaa
catggaactctaaagtctgcccacaaaaatcttgaggtggaacatagagaccttgaagac
cgttacaatcagttactaaaacagaaaggacaattggaagatttggaaaagatgctcaaa
gtagaacaggaaaaaatgctgcttgaaaataaaaaccatgaaacagtagctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacttatagtcaacttttaaaagag
actgaagttttacaaactgaccataaaaatttgaaaagtcttctgaataattccaaactg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacaatatcaacaattggat
attacatccaccaagctgaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattgatgctacagaacagaaca
cttttggagcagaatatggaaagcaaggatctttttcatgttgaacaaagacagtacatt
gataagttaaatgaattaagacgtcagaaggagaaattagaagagaaaattatggatcag
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaagtctaagaaagatattaatcgggaacgtcagaaatctctaacatta
acacctacccgctcagactccagtgaaggatttcttcagctcccccatcaagacagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccagaccttggggaccaagaaa
agcagcaccatgaatgacctggtgcagtccatggtcctagcaggacagtggacaggtagt
actgagaatttggaggttcctgatgatatttcaacgggtaaaaggagaaaagaattggga
gctatggccttctctactacagccatcaacttttcaactgtcaactcttcttcaggcttc
agatccaagcagttggttaataataaagatactacatcctttgaagacataagtccacaa
ggtgttagtgatgattctagcacgggatcaagagttcatgcttcaagaccagccagcctt
gatagtgacagaacatccactagcaatagcaataataatgcttccctacatgaagtcaaa
gcaggtgcagttaataaccaaagcaggccacaaagccacagcagtggagaatttagcctg
cttcatgatcatgaggcttggtccagcagtggtagcagtccaatccagtacttgaaaaga
cagaccagatcaagtccagtgctccaacacaaaatacctgaaacactagagagtcgacat
cacaagatcaaaactggttccccagggagtgaagttgttactctacaacagtttttggaa
gaaagcaataagcttacctcaatacagatcaagtcctcaagtcaagagaatcttttagat
gaagtaatgaaaagtttgtctgtctcttctgactttttgggaaaagacaaaccagttagc
tgtggtctggccaggtcagtaagtggaaaaaccccaggggacttctatgatagacggaca
actaagcctgagtttttgagacccagtcctcgaaaaactgaagaaacctacttcattagt
tctgcaggaaaacctacaccaggcactcaaggaaagataaaattagtaaaagaatcttct
ctgtcacgacaatcaaaagatagtaacccttatgccactttacctcgtgcaagcagtgtg
atctctactgctgaaggaactacacggaggacaagcatccatgattttttgaccaaggac
agtagaccgcctgtatcagttgattcaccaccagctgctgctgacagcaacaccactgca
gcatctaatgtggacaaagtacaagaaagcagaaattcaaaaatcaggtctagggagcaa
caaagctcctaa
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integrated database retrieval system
