Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101027930
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Entry
101027930 CDS
T04350
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X2
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbq03000
]
101027930
Transcription factors [BR:
sbq03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101027930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
ATPase
Motif
Other DBs
NCBI-GeneID:
101027930
NCBI-ProteinID:
XP_003940314
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MALGLQRARSATELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCAAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLS
QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKAEAPPTERCFSLRMKSTLTSRGRTL
NLKAATWKVLHCSGHMRAYKPPAQTSPAGSPNSEPPLQCLVLICEAIPHPGSLEPPLGRG
AFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDFDAVSKSIHTLLSKGQA
VTGQYRFLARSGGYLWTQTQATVVSGGRGSQSESIICVHFLISRVEETGVVLSLEQTEQH
SRRPIRQGGPSQKDASNPGDSLDTPGPRILAFLHPPSLSEAALAADPRRFCSPDLRRLLG
PILDGTSVAATPSTPPATRRPRSPLSADLPDELPVGTENVHRFFTSGKDTEAVETDLDVA
QDADALDLEMLAPYISMDDDFQLNASEQLPRAYHRPPGAVPRPRAQSFHGLSPPAFESSL
LPRWGSDPRLSCSSPSRGDPSASSLMAGARKRTLAQSSEGEDEGMELLGVRPPKRCPSPE
PGNFLLFPLSLVRWGISGILWPSLASWLKAPVL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggctgcagcgcgcaaggtcagccaccgagctccgcaaggaaaagtcccgc
gatgcggcccgcagccggcgcagccaggagaccgaggtgctctaccagctggcgcacacg
ctgcccttcgcacgcggcgtcagcgcccacctggacaaggcctctatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcgccgcaggggagtggaaccaggtgggagca
ggcggagaaccactggatgcctgctacctgaaggccctggagggctttgtcatggtgctc
accgccgagggagacatggcttacctgtcggagaatgtcagcaagcacctgggcctcagt
cagctggagctcattggacacagcatctttgatttcatccacccctgtgaccaagaggag
cttcaggacgccctgaccccccagcaaaccctgtccaggaggaaggcagaggccccccca
acggagcggtgcttctccttgcgcatgaagagtacgctcaccagccgtgggcgcaccctc
aacctcaaagcggccacctggaaggtgctgcactgctctggacatatgagggcctacaag
ccccctgcacagacttctccagctgggagccccaactcagagcccccccttcagtgcctg
gtgctcatctgcgaagccatcccccacccaggcagcctggagcccccgctgggccggggg
gccttcctcagccgccacagcttggacatgaagttcacctactgtgatgacaggatcgca
gaagtggccggctacagtcctgatgacctgattggctgttctgcctacgagtacatccac
gcgctggacttcgatgcagtcagcaagagcatccacacgttgctcagcaagggccaggca
gtaacagggcagtatcgattcctggcccggagcggtggctacctgtggacccagacccag
gccacagtggtgtcagggggccggggctcccagtcggagagtatcatctgtgtccatttt
ttaatcagccgggtagaagagaccggagtggtgctgtccctggagcaaacggagcaacac
tctcgcagacccattcggcagggtggcccctcccagaaggatgcttctaaccctggggac
agccttgacacccctggcccccggatccttgcattcctgcaccccccttccctgagcgag
gctgccctggccgctgacccccgccgtttctgcagccctgacctccgtcgcctcctggga
ccaatcctggatgggacttcagtagctgccacccccagcaccccaccagccacacggcgc
ccccgaagtcctctttcggctgatctcccagatgaactacctgtgggcacagagaatgtg
cacagattcttcacttctgggaaagacactgaggcggtggagacagatttagatgtagct
caggatgctgacgctctggatttggagatgctggccccctacatctccatggatgatgac
ttccagctcaacgccagcgaacagctacccagggcctaccacagacctccgggggctgtc
ccccggccccgtgctcagagcttccacggcctgtcacctccagcctttgagtcctccctg
ctgccccgctgggggagtgacccccggctgagctgctccagcccttccagaggggacccc
tccgcatcctctctcatggctggggctcggaagaggacgctggcccagagctcagaaggc
gaggacgagggaatggagctgctgggagtgagacctcccaaaagatgccccagcccagaa
cccggaaactttctgctgtttcccctcagcctggtgcgttgggggattagtgggattctc
tggccctcattagctagctggcttaaagctcctgttttataa
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