Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101029192
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Entry
101029192 CDS
T04350
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101029192 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101029192 (EXOSC1)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101029192 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101029192 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
101029192
NCBI-ProteinID:
XP_003922387
UniProt:
A0A2K6RYC7
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtcagatactgcattcccggcgaacgtctgtgtaatttggaggagggc
agcccaggcagtggcacctatacccgccacggttacatcttttcgtcgcttgccggctgc
ctgatgaagagcagcgaaaacggcgcgcttcctgtggtgtctgtaatgagagaaacagag
tcccaattactgccagatgtgggagctattgtaacctgtaaggtctccagcatcaattcg
cgctttgccaaagtacacatcctgtatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgttcgagcaactgaaaaagacaaggttgaaatttataag
agtttccgcccaggtgacattgtcttggccaaagtgatctccctaggtgacgcacagtcc
aactacctgctaaccactgccgaaaacgagctgggagtggtggtagcccacagtgagtca
ggtgtccagatggttcccatcagttggtgtgagatgcagtgccctaagacccacactaaa
gagttccggaaagtggcccgcgtacagcctgaattcttgcagacctaa
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