Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101032366
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Entry
101032366 CDS
T04350
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101032366 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101032366 (XAB2)
03041 Spliceosome [BR:
sbq03041
]
101032366 (XAB2)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101032366 (XAB2)
Spliceosome [BR:
sbq03041
]
Complex B
Other components
Prp19-related factors
101032366 (XAB2)
Complex C
101032366 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
101032366
NCBI-ProteinID:
XP_003938932
UniProt:
A0A2K6SQU6
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGSPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgttttcgaggaagag
gacctcccctatgaggaagaaatcatgcggaaccagttctctgtcaaatgctggctccgc
tacattgagttcaaacagggctccccgaagcccaggctcaatcagctgtacgagcgggca
ctcaagctcctgccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccctgcctatgaagatgtcaacaattgtcatgaa
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctg
atggaccaggggcgtgtcacacacacccgccgcaccttcgaccgtgccctccgggcgctg
cccatcacacagcactctcgaatttggcccctgtatcttcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgtggctaccggcgcttcctcaagctgagtcccgagagtgca
gaggagtacatcgagtacctcaagtcaagtgaccggctggatgaagccgcacagcgcctg
gccacagtggtgaacgatgagcgtttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccagacaaggtccagtccctcaacgtg
gacgccatcatccgtggaggcctcacccgcttcactgaccaactgggcaagctctggtgt
tcactcgccgactactacatccgcagcggccactttgagaaggctcgggacgtgtacgag
gaggccatccggacagtgatgaccgtgcgggacttcacacaggtgtttgacagctacgcc
cagttcgaggagagcatgatcgccgcaaagatggagaccgcgtcagagctggggcgcgag
gaggaggacgatgtggacctggaactgcgcctagcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctgcgccagaacccacaccatgtgcacgagtgg
cataagcgtgtcgccctgcaccagggccgtccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaaaccccacactctgtgggtggca
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagctggagctccggcacgagaactatgacgaggccctgcggctgctgcggaaggccacg
gcactgcctgcccgccgggccgagtacttcgacggctcagagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtgtggtccatgcttgccgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaatgtgtcggacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggcacgggacctgttt
gaacaggctctagacggctgcccaccgaaatacgccaagaccttgtacctgctgtatgca
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtatgagcgcgctacc
agggccgtggagcctgcgcagcaatacgacatgttcaacatctacatcaagcgggcggcc
gagatctacggggtcacccacacgcgtggcatctaccagaaggccatcgaggtgctgtcg
gacgagcatgcacgtgagatgtgcctgcggtttgcagacatggaatgcaagctgggggag
attgaccgtgcccgggccatctacagcttctgctcccagatctgcgacccccggacgacc
ggggcattctggcagacgtggaaggactttgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgcatccggcggagcgtgcaggccacatacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtctcgggcagcgccacgggcaccgtgtccgacctggcc
cctgggcagagcggcatggatgacatgaagctgttggaacagcgcgcggaacagctggcc
gccgaggcggagcgagaccagcccctgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctccagggaggagctggcagagctggcgcagcaggtcaacccggaggagatccag
ctgggcgaggatgaggacgaggacgagatggacctggagcccaatgaggtccggctagag
cagcagagcgtgccagctgctgtgtttgggagcctgaaagaagactga
DBGET
integrated database retrieval system
