Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101032829
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Entry
101032829 CDS
T04350
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101032829 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101032829 (CNOT6)
Enzymes [BR:
sbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101032829 (CNOT6)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101032829 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101032829 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101032829
NCBI-ProteinID:
XP_010330144
UniProt:
A0A2K6U8F8
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLAYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPLMPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtatacaattatgtcttct
gaggaagcagcaaatggaaagaaatcccattgggcagagcttgaaataagtggaaaagta
agaagcttaagtgcatctttgtggtcactaactcatctgacagctttgcatttgagtgac
aattccctgtcccgaattccttcagacattgctaagcttcacaatctggcatatttggac
ctgtcatctaataaaatccgtagcttacccgcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccccttacccaggatatattgaacctttat
caggaaccagatggaacaagacggctgctgaactatttgcttgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccacctccaaggtcttggattatgttgcaagaacca
gatagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcatgggcactaaactgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatatcgtaagtcttcaggag
gttgaaacggaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaagtctagagctaggacaatgtcagaacaagaaaggaaacatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagccatggcaaattctgaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaagccacatcttggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggtgcaaactatgatgttcctc
tcagaagtgaagaacattattgataaagcctctcgtaacctcaaatccagtgtattggga
gaatttggaactattccacttgtgttatgtgcagatcttaattctttgccagattctggt
gttgtagaatatttgagcacaggtggagtagaaacaaatcacaaagactttaaggagctg
aggtataatgaaagtctcacaaacttcagctgtcatgggaagaatggaaccaccaatgga
aggatcactcatggtttcaagttaaagagtgcctatgagagtggtctgatgccttacaca
aattacacatttgattttaagggtataatcgactacattttctattctaaacctcagctg
aacaccttaggcatcctgggccctctggaccaccactggctggttgagaataacatcagt
ggctgcccacaccccctcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttaatgccccaagtcaatggcatccaccttcctggcaggaggtag
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