Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101034217
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Entry
101034217 CDS
T04350
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X2
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04140
Autophagy - animal
sbq04148
Efferocytosis
sbq05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101034217 (VPS39)
04148 Efferocytosis
101034217 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101034217 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbq04131
]
101034217 (VPS39)
Membrane trafficking [BR:
sbq04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101034217 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
WD40_like
Beta-prop_RIG_2nd
KCTD11_21_C
Lgl_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
101034217
NCBI-ProteinID:
XP_003929007
UniProt:
A0A2K6V5X9
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRLCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt
ctggctgcttgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttggttgcaacaggtttgaagtgacactagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtttcccagttcaagattttggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactacggtt
tcaaaggcaaaaggagcatcactgtttacatgtgacctccagcatacagagactggtgag
gaggttttgcggctgtgtgtggcagtgaaaaagaagctgcagctctatttctggaaggac
agggaatttcatgaattgcagggggactttagtgtaccagatgtgcccaagtccatggcg
tggtgtgaaaattctatttgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cctctggctgatggaaaagtggctgtgggccaggatgatctcaccgtggtactcaatgag
gaagggatctgcacacagaaatgtgccctgaactggacggacataccagtggccatggag
caccagcctccctacatcatcgcagtgttgcctcgatatgtggagatccgaacatttgaa
ccaaggcttctggtccaaagcattgaattgcaaaggcctcgtttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcatccctgtccctatg
gcaacccaaatccaacagcttctccaggacaagcaatttgaattggctctgcagctcgca
gaaatgaaagatgattccgacagtgaaaagcagcagcaaattcatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa
cttggcacagatcccacccatgtgatgggcctgtaccctgacctgctgcccacagactac
aggaagcagttgcagtatcccaacccattgcctgtgctctcgggggctgaactggagaag
gcacacttagctctaattgactacctgacacagaaacgaagtcaactggtaaagaagctg
aatgactccgatcaccagtcaagcacctccccactcatggaaggcactcccaccatcaaa
tccaagaagaagctgctacaaatcatcgacaccaccctgctcaagtgctatctccatacg
aatgtggccctggtggcccccttgctacgcctggagaacaatcactgccacatcgaggag
agcgagcacgtgctgaagaaggctcataagtacagtgagctgatcattctgtatgagaag
aaggggctccacgagaaagctctgcaggtgcttgtggaccagtccaagaaagccaactcc
cctctgaaaggccacgagaggacagtgcagtatctgcagcatctgggcacagaaaacctg
catttgattttctcctactcagtgtgggtgctgagagatttcccagaagatggcctgaag
atatttactgaagatctcccggaggtggagtctctgccacgtgatcgagtcctcggcttc
ttaatagagaattttaagggtctggctattccttatctggaacacatcatccacgtttgg
gaggagacaggctctcggttccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaaaccccagtcccagctgga
gaggaagagggtgagctgggagaataccggcaaaagctcctcatgttcttggagatttcc
agctactatgatccaggccggctcatctgtgattttccctttgatggcctcttagaagaa
cgagctctcctgttggggcgcatggggaaacatgaacaagctcttttcatttatgtccac
atcttgaaggatacaaggatggctgaggagtactgccacaaacactatgaccaaaacaaa
gatggcaacaaagatgtatatctgtccctgcttcggatgtacctgtcgccccccagcatt
cactgcctggggccaatcaagctggaactgctggagccaaaggccaacctccaggctgcc
ctgcaggtcctcgagctacatcatagcaaactggacaccaccaaggccctcaaccttctg
ccagcaaacactcagatcaatgacatacgcatcttcctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcagagttcctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaaaattgggaacagtgcatttgcaagataccctaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacttga
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integrated database retrieval system
