Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101034927
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Entry
101034927 CDS
T04350
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04820
Cytoskeleton in muscle cells
sbq04926
Relaxin signaling pathway
sbq04933
AGE-RAGE signaling pathway in diabetic complications
sbq04974
Protein digestion and absorption
sbq05146
Amoebiasis
sbq05165
Human papillomavirus infection
sbq05200
Pathways in cancer
sbq05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101034927 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101034927 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101034927 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101034927 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101034927 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
101034927 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101034927 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
101034927 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101034927 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
101034927 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101034927 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbq04147
]
101034927 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101034927 (COL4A3)
Exosome [BR:
sbq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101034927 (COL4A3)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101034927 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101034927
NCBI-ProteinID:
XP_003925510
UniProt:
A0A2K6U8Y2
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MSPRMALRPQVLLLPLLLVLLAAASAAGKGCICKDKGQCFCDGAKGQKGEKGFPGPPGSP
GQKGFTGPEGLPGPQGHKGSLGLPGLTGAKGVRGITGLPGFSGSPGLPGTPGTTGPYGLA
GVPGCNGSKGEQGFPGLPGTPGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGDRVIGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTNLKGEKGDKGAMGKPGPPGPSGLPGESYGSEKGAHGEPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGLTGEDGIKGQKGDTGPPGFRGPTEYYDTYQEKGDKGIPG
PPGPKGARGPQGPSGPPGVPGSPGPSRPGLRGVPGWPGLKGSKGERGPPGKDAMGTPGSP
GCPGSPGPTGSPGPPGPPGDIVFRKGPPGDRGLPGYLGSPGILGAEGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK
GETLQPKGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGFPGPAGPAGPPGYGPQGKPGPKGSQGVPGAPGPPGEAGPRGEVSVSTPVPGPPGP
PGAPGLAGPQGPPGIPGSTGKYGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSL
GCPGKMGDPGLPGKPGLPGAKGEPALAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPQGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGTKGD
PGIPGLDRSGFPGETGSPGRPGHQGKTGPPGQKGYPGNPGILGPPGEDGMVGMMGFPGAI
GSPGPPGNPGMPGQKGSLGIPGVKGQRGTPGAKGEQGDKGNPGPSQISHLIGDKGEPGLK
GFAGNMGEKGNRGVPGLPGLKGLQGLPGPPGSPGPRGDLGSIGNPGEPGPRGVPGSMGNM
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMG
KKGEMGQPGPPGHSGPAGPEGVIGSPGSPGLPGRPGPHGDLGFKGIKGFPGPPGIKGPPG
LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLGAPPGPRGDPGAQGAKGDRGAPGLP
GLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQKGNRGLPGSRGSPGKPGPPGPPG
SHVKGIKGDKGSMGHPGPKGPPGTVGDMGPPGHPGAPGTPGLPGLRGDPGFQGFPGVKGE
KGNPGFLGSTGPPGPMGPKGPPGIRGDPGTLQIISLPGSPGPPGTPGEPGMRGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPVGEKGNKGSKGQQGPPGSDGFPGLKGKPGDIGSPAI
WTKRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLYVQGNQRAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPMNMAPITGSALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggatggcgctcaggccgcaggtgctcctgctgccgctcctgctggtgctc
ctggcggcggcgagtgcggccggcaagggctgtatctgtaaagacaagggccagtgcttc
tgtgacggagccaaagggcagaagggggaaaaaggctttcctggaccccctggttctcct
ggccagaaaggattcacaggtcctgaaggcttgcctggaccacagggacacaagggctct
ctgggacttccaggactcactggtgccaaaggtgtaaggggaataactggattgccagga
ttttctggttctcctggacttccaggcaccccaggcactactggaccgtatggacttgct
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ccaggctacccagggatcccgggtgctgctggtttgaaagggcaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgccaggagctccagga
ccacagggtttgccaggccctccaggttttcctggccctgttggcccacctggtcctccg
ggattttttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgac
agagtgataggacaaaaaggagagcggggtgtgaaaggattaacaggacccccaggacca
ccaggaacagttattgtgaccctcactggcccagacaacagaacgaacctcaagggggaa
aagggagacaagggagcaatgggcaagcctggacctcctggaccctcaggactgcctgga
gaatcatacggatctgaaaagggtgctcatggagagcctggcccacagggaaaacctgga
aaagatggtgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggttaacaggtgaagatggcattaagggacagaaaggggacactggccctccaggattt
cgtggtccaacagaatattatgacacataccaagaaaagggagataaaggcattccaggc
ccaccagggcccaaaggagctcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggaccatcaaggcctggcctcagaggagtccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggccccccaggaaaggatgccatggggactcctgggtcccca
ggatgtcctggttcaccaggccctacaggatcaccgggacctccaggaccaccaggtgac
atcgtttttcgcaagggtccacctggagatcgcggactgccaggctacctagggtctcca
ggaatccttggagctgaaggacccaaaggagaaccaggtctcttgtgcacacagtgccct
tatatcccagggcctcccggtctgccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagccggcctgaaaggaagtccaggatccccaggaaatacagga
cttccaggatttccaggattcccaggtgcccagggtgacccaggactgaaaggagaaaaa
ggcgaaacacttcagcctaaggggcaagtgggtgccccaggggacccggggctaagaggg
caacctgggagaaagggcttggatggaattcctggaacaccaggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggttcccaggacctgcaggaccagctggaccacctggctatggaccc
caaggaaagcctggtcccaagggcagtcaaggagttcctggagcccctggaccacccgga
gaagccggtcctaggggagaagtcagtgtttcaacaccagttccaggcccaccaggacct
ccaggggcccctggcctcgctggcccccaaggtccacctggtatccctggatccacgggg
aaatatggagatcctggtcttccagggcctgatggtgaaccaggaattccaggaattgga
tttcctgggcctcctggacctaagggagatcaaggttttccaggtacaaaaggatcactg
ggttgtcctggaaaaatgggagatcctgggttacctggaaagccaggcctcccaggagcc
aagggagagccagcactagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccaggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctgggccacct
ggagaacaaggaccccaaggaaggtgcatagaaggtccaaggggtgcccaaggacttcca
ggattaaatggattgaaagggcaacaaggcagaagaggtaaaacagggacaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaagg
ccaggccatcagggcaagacgggaccgccaggtcaaaaaggatatccaggaaatccagga
attttagggccaccaggtgaagatggaatggttgggatgatgggctttcctggagccatt
ggctctccagggccccctgggaacccaggcatgccagggcagaagggaagccttggaatt
ccaggagtgaagggccagagaggaaccccaggagccaagggggaacagggagataaagga
aatcctgggccttctcagatatcccacttaataggggacaaaggagaaccaggtctcaaa
ggattcgcaggaaatatgggtgagaaaggaaacagaggtgttccagggcttccaggttta
aaaggcctccaaggactacctggaccaccaggatcaccaggccccagaggagatttgggc
agcattgggaatcctggagaaccaggaccacgtggtgtgccagggagcatggggaacatg
ggtatgccaggttctaaaggaaaaagaggaactttgggattcccaggtcgagctggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccaggttattcagaa
ggtacaagaccaggaccaccaggaccaacgggggatccaggactgccgggtgatatggga
aagaaaggagaaatggggcaacctggcccacctggacattcggggcctgctggacctgag
ggagtcattggaagtcctggaagtcctggccttccaggaaggccaggtcctcatggtgat
ttgggttttaaaggaatcaaaggcttcccgggccctccaggaatcaaaggccctccaggt
cttccgggattcccaggatctcctggaccaatgggtataagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacaggtttgctgggggcccctccaggc
ccaagaggggatcctggtgctcaaggagccaaaggagacagaggagccccaggtttgcct
ggcctccctggcagaaaaggggccatgggagatgctgggcctcgagggcccacaggcatc
gaaggatttccagggccaccaggtctgccgggtgcaatcatccctggccagaaaggaaac
cgcggtctgccaggctcaagaggaagcccaggcaagcccggtccccctggacctccaggg
agtcacgtaaaaggcataaaaggagacaaagggtctatgggccaccctggcccaaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatccgggagcaccaggcactcca
ggtcttccaggcctcagaggtgatcctggattccaggggtttccgggtgtgaaaggagaa
aagggtaatcctggatttctaggatccactggacctccaggaccaatggggccaaaagga
ccacctggtatacgtggagaccctggcacccttcagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcggggagaacccgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaaaccaggcaaagatggaaaaccagga
actcctggaccagttggagaaaaaggcaacaaaggttctaaaggacagcaaggaccacct
ggatcagacggattccccggtttgaagggaaagcctggagacattggatcacccgcaatc
tggacgaagagaggttttgtcttcacccgacacagtcaaaccacagcaattccttcatgt
ccagaagggacagtgccactctacagtgggttttcttttctttatgtacaaggaaatcaa
cgagcccacggacaagaccttggaactcttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatatcaatgatgtatgtaatttcgcctctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatgaacatggctcccattactggcagtgct
cttgagccttatataagcagatgcactgtctgtgaaggtcctgcgatcgccatagccgtt
cacagtcaaaccactgacattcctccatgtcctcatggctggatttctctctggaaagga
ttttctttcatcatgttcacaagtgcaggttctgagggcgctgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctcgaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaaccctgaaaga
atgttcagaaagcctattccatcaactgtgaaagctggagaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaagacaatga
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integrated database retrieval system
