Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101035080
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Entry
101035080 CDS
T04350
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101035080 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101035080 (EDC4)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101035080 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101035080 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
DUF445
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
101035080
NCBI-ProteinID:
XP_003936366
UniProt:
A0A2K6TAJ8
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSNAYNGDLNGLLVPDPLCSGDGTS
THKTGFRTMPPISLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERILLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLARPSEELTLSPKLQ
LDGSLAMSSSGSLQASPRGLLPSLLPAPADKLTPKGPSQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSASEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHNTPSLLEAALTQEASTPDGQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGSFGTKVP
APRLPAKDWKTKGSPRASPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPTLIWQQQRE
LAELQHSQEELLQRLCTQLEGLQNTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSLRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRVGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLSLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLVTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcctgcgggcggccccagtgcagagagcccacggccatccaatgcctac
aatggggacctcaatgggcttctggtcccagaccccctctgctcaggtgatggtacctca
acacacaagactggttttcggaccatgccacccattagcctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctctacctgcattgggattttggctaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggaacagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctccgccatggtgcgg
gtgatcagtgtcagcacttcggagcggatcttgctcaagggctttacaggcagtgtggct
gatctggctttcgcgcacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacgccactgaaccacttccgcaggatcatctggtgtcccttc
atccctgaggagagcgaggactgctgtgaagagagcagcccgacagtggccctgctgcat
gaagaccgggctgaagtgtgggacctggacatgctccgctccagccacagcacctggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagccctctcccctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgagggacaagatgagccaaggtgtctgcatgagtgg
aagcctcatgatgggcggcccctctcctgccttctgttctgtgacaaccataagaaacaa
gaccccgatgtccctttctggaggttccttattactggtgctgaccagaaccgggagcta
aagatgtggtgcacagtgtcctggacctgcctgcagactattcgcttctccccagatatc
tttagctcagtgagtgtgccccctagcctcaaggtttgcttggatctctcagcagaatat
ctgattctcagtgacgtgcaacggaaggtcctctatgtgatggagctgctacagaaccag
gaggagggccgtgcctacttcagctccatctcggagttcctgctcacccaccctgtgcta
agctttggtatccaggttgtgagtcgttgccggctgcggcacactgaggtgctgcccgct
gaggaggagaatgacagcctgggtgctgatggtacccatggagccggtgccatggagtct
gcagctggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
attcgcttccagccacagctgaaccctgatgtagtcgccccactccccacgcacactgcc
cacgaggactttacatttggagagtctcggcctgaactgggctctgagggcctggggtca
gccgctcacggctcccagcctgacctccgacgaatcgtggagctgcctgcacctgccgac
ttcctcagtctaagtagtgagaccaagcccaagttgatgacacctgatgccttcatgaca
cctagcgcctctctgcagcagatcactgcctctcccagcagcagcagcagtggtagcagc
agcagcagcagcagtagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttggccaggccatctgaggagctgaccttgagccccaagctgcag
ctggatggcagcctggcaatgagcagcagtggcagcctgcaggcaagcccgcgtggcctc
ctgcccagcctgctcccagccccagctgacaaactgactcccaaggggccgagccaggtg
cctactgctgcctctgcactttccttggagctgcaggaagtggagcccctggggctaccc
caagcctccccgagccgtacccgctctcctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcgtctgaggccctgtcccgtggctttggctcctctgca
tcagagggccttgagccagacagtatggcttcagctgcctcagcattgcacctactgtcc
ccacggccccggccagggcccgagctcggcccccagcttggcctcgatggaggccctggg
gatggagatcggcataataccccctccctcttggaggcagccttgacccaggaggcctca
acccctgacggtcaggtttggcccacagcacctgacattactcgtgagacctgcagcact
cttgcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagccaggatgccagtgctgagcaaagtgat
cacgatgatgaagtggccagccttgcctctgcttcaggaagctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgagcctcacccaag
ctcaagaggaaaagcaagaaggatgatggggatgcggccatgggatcccggctcacagag
caccaggtggcagagccccctgaggactggccaacgctaatttggcaacagcagagagag
ctggcagagctgcagcacagccaagaagagctgctgcagcgtctgtgtacccagctcgaa
ggtctacagaacaccgtcacaggccacgtagaacgtgcccttgagactcggcatgagcag
gagcagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcag
gagcagctgacacaacagttgtcccaggcactgtcttcagctgtagctgggcggctggaa
cgcagcttacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggag
cctgttgcaggccaactgagcaactctgtagccaccaagctcacagctgtggagggcagc
atgaaagagaacatctctaaactgctcaagtccaagaacttgactgatgctattgcccga
gcagctgcagacacattacaggggccgatgcaggctgcctaccgagaagccttccagagt
gtggtgctgccagcctttgagaagagctgccaggccatgttccagcaaatcaatgatagc
ttccgggtggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaag
gcacgggaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcaca
ctgcagagtgccactgagcagatggcagccactgttgccagcagtgttcgggctgaggtg
cagcaccagctgcacgtggctgtgggcagcttgcaggagtccattttagcacaggtacaa
cgcattgttaagggtgaggtgagtgtggcgctcaaggagcagcaggccgctgtcacctcc
agcatcatgcaggccatgcgttcagctgctggcacacctgtcccctctgcccaccttgac
tgccaggcccagcaagcccatatcctccagctgctgcagcagggccacctcaatcaggcc
ttccagcaggccctaacagctgctgacctgagcctagtgctgtatgtgtgtgaaactgtg
gacccagcccaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttcc
ctcattcagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggccgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctct
gttatggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactca
cttggcaaggcagcccggcgtctcagcctcatgctgcatggccttgtgacccctagcctc
ccttag
DBGET
integrated database retrieval system
