Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101035159
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Entry
101035159 CDS
T04350
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03013
Nucleocytoplasmic transport
sbq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101035159 (UPF2)
03015 mRNA surveillance pathway
101035159 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101035159 (UPF2)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101035159 (UPF2)
mRNA cycle factors
P-body specific factors
101035159 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
101035159
NCBI-ProteinID:
XP_003930664
UniProt:
A0A2K6SFV8
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MPAERKKPASMEEKDSLPNNKEKDCSERRPVSSKEKPKDDIKLTAKKEVSKAPEDKKKRL
EDDKKKKEDKERKKKEEEKVKAEEESKKKEEEKKKHQEEERKKQEEQAKRQQEEAAAAQM
KEKEESVQLHQEAWERHHLRKELRSKNQNAPDTRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFASSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLIPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNKDDSKEAKESKDSKEVSSPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDAKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDDDDEGEEEEEENTDYLTDS
NKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAI
PLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQ
QAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNAD
LIFKTGGRRR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagactctttaccaaataac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcaaggagaagccaaaagacgat
attaagctcactgccaagaaggaggtcagcaaggcccccgaagacaagaagaagagactg
gaagatgataagaaaaaaaaggaagacaaggaacgcaagaaaaaggaagaagaaaaggta
aaggcagaggaagaatcaaagaaaaaagaagaagagaaaaagaaacatcaagaagaagag
agaaagaagcaagaagagcaggccaaacgtcagcaagaagaagcagcagctgctcagatg
aaagaaaaagaagaatctgttcaacttcatcaggaagcttgggaacgccatcatttaaga
aaggaacttcgtagcaaaaaccaaaatgctcctgacacccgaccagaggaaaacttcttt
agccgccttgactcaagtttgaagaaaaatactgcttttgtcaagaagctaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaacttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctgaaaatctctgatgtgaactgt
gccgtgcacctctgctctctctttcaccagcgttatgctgactttgcctcgtcacttctt
caggtctggaagaaacattttgaggcaaggaaagaggagaaaacacctaacattaccaag
ttaagaactgatttgcgttttattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggagtcc
cacactcatgtctctgtagtgattagtttctgtcgacattgtggagatgatattgctgga
cttataccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacagcctttccagaaccttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgcattctgcattctaaaggggagctcagtgaagatagacataaacagtatgaggag
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagaacatgggcctggaatt
gatatattcacacctgggaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaggcttttgtcccagccatc
ttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaacaaagatgattccaaa
gaggcaaaagaatctaaggatagtaaggaggtatcaagtcctgatgatttggaacttgag
ttggagaatctagaaattaatgatgacaccttagagttagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaagatgaggaagccagcactgga
tctcatctcaagctcatagtagatgctttcctacagcagttacccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagccaacagg
aagaagttggtacgggcactcttcatagttcctagacaaaggttggatttgctaccattt
tatgcaagattggttgctactttgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaataaaactgttcgttttattggagaactaactaaatttaagatgttcaccaaa
aatgacacactacattgtttaaagatgcttctgtcagacttctctcatcaccatattgaa
atggcatgcaccctgctagagacgtgtgggcggtttcttttcagatctccagaatctcac
ctgaggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcatcttgat
gcaagatacgtcacaatggtagagaacgcatattactactgcaacccgcctccagctgaa
aaaactgtgaaaaagaaacgtcctcctctccaggaatatgtccgcaaacttttgtacaag
gatctctctaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaggactatgttatctgttgtatgataaacatctggaatgtgaaatac
aatagcatccactgtgtagccaacctcttagcaggactagtgctctaccaagaggatgtt
gggatccacgttgtagatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagaggcgtatcagcagcgccaagttcttaggagaactttataattac
cgaatggtggaatcagctgttattttcagaactctgtattcttttacttcatttggtgtt
aaccctgatggctctccaagttccctggacccacccgagcatcttttcagaattagactc
gtatgcactattctggacacatgtggccaatactttgacagaggttccagtaaacgaaaa
cttgattgtttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacaa
gacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagatgcaaaagat
tctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggggctgaa
acagaagaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggttct
gacgatgatgatgagggagaagaggaggaggaagagaatacagattaccttacagattcc
aataaggaaaatgaaactgatgaagagaacaccgaggtaatgattaaaggcggtggactt
aagcatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatgatgcta
gaaaatctgcagcaacgaagtggtgaatctgttaaagtacaccaacttgatgttgccatt
cctttgcatctcaaaagccaactgaggaaagggcccccactgggaggtggggaaggagag
gccgagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacagcag
tttaagatccttaatgtacccatgtcctctcaacttgctgcaaatcactggaaccagcaa
caggcagaacaagaagagaggatgagaatgaaaaagctcacgctagatatcaatgaacgg
caagaacaagaagattatcaagaaatgttgcagtctcttgcacagcgtccagctccagca
aacaccaatcgtgaaaggcggcctcgctaccaacatccgaagggagcacctaatgcagat
ctaatctttaagactggtgggaggagacgttga
DBGET
integrated database retrieval system
