Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101035409
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Entry
101035409 CDS
T04350
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
101035409 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbq04040
]
101035409 (SCN1A)
Ion channels [BR:
sbq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101035409 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
101035409
NCBI-ProteinID:
XP_010350772
UniProt:
A0A2K6UK24
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSSPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSIEKNITVNY
NGTLINETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYICVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMIEQLKKQQEAAQQAVTATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMQ
KGVAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQINVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
TGDRFDIEEVNNHTDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPQYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSEYVTTILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKANPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKASYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLIKEDMIIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaaagatgatgatgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggacctg
gatccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtagccctcctgattggacaaagaatgtagaatacacc
ttcacaggaatatatacttttgagtcacttataaaaattattgcaaggggattctgttta
gaggattttactttccttcgggatccatggaactggcttgatttcactgtcattacattt
gcgtatgtcacagaatttgtggacctgggcaatgtctcggcattgagaacattcagagtt
ctccgagcactgaagacaatttcagtcattccaggcctgaaaaccattgtgggagccctg
atccaatctgtgaagaagctctcagatgtaatgatcctgactgttttctgtctgagcgtg
tttgctctcattgggctgcagctgttcatgggcaacctgaggaataaatgtatacaatgg
cctcccaccaatgcttccctggaggaacatagtatagaaaagaatataaccgtgaattac
aatggcacacttataaatgaaactgtctttgagtttgactggaagtcatatattcaagat
tcaagatatcattatttcctggagggttttttagatgcactactatgtggaaatagctct
gatgcaggccaatgcccagagggatatatatgtgtgaaagctggtagaaatcccaattac
ggctacacaagctttgataccttcagttgggcttttttgtccttgttccgactaatgact
caggacttctgggaaaatctttatcaactgacactacgtgctgctgggaaaacgtacatg
atattttttgtgctggttattttcttgggctcattctacctaataaatctgatcctggct
gtggtggccatggcctatgaggagcagaatcaggccaccttggaagaagctgaacagaaa
gaggctgaatttcagcagatgattgaacagcttaaaaagcaacaggaggcggctcagcag
gcagtgactgcaactgcctcagaacattccagggagcccagtgcagcaggcaggctctca
gacagctcatctgaagcctctaagttgagttccaagagtgccaaggaaaggagaaatcgg
aggaagaaaagaaaacaaaaagagcagtctggtggggaagagaaagatgaggatgaattc
cataaatctgaatctgaagacagcattaggaggaaaggatttcgcttctccattgaagga
aacagattgacatatgaaaagaggtactcttccccacaccagtctttgttgagcatccgt
ggctccctattctcaccaaggcgaaatagcagaacaagccttttcagctttaggggacga
gcaaaggatgtgggatctgagaatgactttgcagatgatgagcacagcacctttgaggat
aacgagagccgtagagattccttgtttgtgccccgacgacacggagagcgacgcaacagc
aacctgagtcagaccagtaggtcatcccggatgctggcagtgtttccagcgaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgaaatgagaaagagaaggtcaagttctttccatgtttcc
atggactttctagaagatccttcccaaagacaacgagcaatgagcatagccagcattcta
acaaatacagtagaagaacttgaagaatcaaggcagaaatgcccaccctgctggtataaa
ttttccaacatattcttaatctgggactgttctccatattggttaaaagtgaagcatgtt
gtcaacctggttgtgatggatccatttgttgacctggccatcaccatttgtattgtctta
aacactcttttcatggccatggagcactatccaatgacggaccatttcaacaatgtactt
acagtaggaaacctggttttcactgggatctttacagcagaaatgtttctgaaaattatt
gccatggacccttactattatttccaagaaggctggaatatctttgatggttttattgtg
acgcttagcctcgtagaacttggactcgccaatgtggaaggattatctgttctccgttca
tttcgattgctgcgagttttcaagttggcaaaatcttggccaacattaaatatgctaata
aagatcatcggcaattccgtgggagctctgggaaatttaacccttgtgttggccatcatt
gtcttcatttttgctgtggtcggcatgcagctctttggcaaaagctacaaagattgtgtc
tgcaagatcgccagtgattgtcagctcccacgctggcacatgaacgacttcttccactcc
ttcctgattgtgttccgcgtgctgtgtggggagtggatagagaccatgtgggattgtatg
gaggtcgctggccaagccatgtgccttactgtcttcatgatggtcatggtgattggaaac
ctagtggtcctgaatctctttctggccttgcttctgagctcgtttagtgcagacaacctt
gcagccactgatgatgataatgaaatgaacaatctccaaattgctgtggataggatgcag
aaaggagtagcttatgtgaaaagaaaaatatatgaatttattcaacagtccttcgttaga
aagcaaaagattttagatgaaattaaaccactcgatgatctaaataacaagaaagacagt
tgtatgtccaatcatacaacagaaattgggaaagatcttgactatcttaaagatgtaaat
ggaactacaagtggtataggaactggcagcagtgttgaaaagtacattattgatgaaagt
gattacatgtcattcataaacaatcccagtcttactgtgacggtaccaattgctgtagga
gagtctgactttgaaaatttaaacacggaagactttagtagtgaatcagatctggaagaa
agcaaagagaaactgaatgaaagcagcagctcgtcagaaggtagcactgtggacattggc
gcacctgcagaagaacagcctgtagtggaacctgaagaaaccctggaacctgaagcctgt
ttcactgaaggctgtgtacaaagattcaaatgttgtcaaatcaatgtagaagaagggaga
ggaaaacagtggtggaacctgagaaggacctgcttccgaatagttgaacacaactggttt
gagaccttcattgttttcatgattctccttagtagtggtgctctggcatttgaagatata
tatattgatcagcgaaagacaattaagacaatgttggaatatgctgacaaagttttcact
tacattttcattctggaaatgctcctaaaatgggtggcatacggctatcaaacatatttc
accaatgcctggtgttggctggacttcttaattgttgacgtttcattggtcagtttaaca
gcaaatgccttgggttactcagaacttggagcgatcaaatctctcagaacactaagagct
ctgagacctctaagagccttatctcgatttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtgcttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccaca
actggtgacagatttgacattgaagaagtgaataatcatactgattgcctaaaactaata
gaaagaaatgagactgctcgatggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaaaggctggatggatataatgtatgcg
gcagttgattctagaaatgtggaactccagcctcagtatgaggaaagtctgtacatgtat
ctttactttgttattttcatcatctttgggtccttcttcaccttgaacctgtttattggt
gtcatcatagataatttcaaccagcaaaaaaagaagtttggaggtcaagacatctttatg
acagaagaacagaagaaatactataatgcaatgaaaaaattaggatcgaaaaaacctcaa
aagcctatacctcgaccaggaaacaaatttcaaggaatggtctttgacttcgtaaccaga
caagtttttgacataagcatcatgattcttatctgtcttaacatggtcacaatgatggtg
gaaacagatgaccagagtgaatatgtgactaccattctgtcacgaatcaatctagtgttc
attgtgctgtttactggagagtgtgttctgaagctcatctccctacgccattattatttt
accattggttggaatatttttgattttgtggttgtcattctctccattgtaggtatgttt
cttgccgagctgatagaaaagtattttgtgtcccctaccctgttccgagtgatccgtctt
gccaggattggccgaatcctccgtctgatcaaaggagcaaaagggatccgcacgctgctc
tttgctttgatgatgtcccttcccgcgttgtttaacatcggcctcctgctcttcctggtc
atgttcatctacgccatctttggaatgtccaactttgcctatgttaagagggaagttgga
attgatgacatgttcaactttgagacctttggcaacagcatgatctgcctgttccaaatt
acaacctctgctggctgggatggattgctagcacctattctcaacagcaaaccacccgac
tgtgaccctaataaagctaaccctggaagctctgttaagggagactgtgggaacccatct
gttgggattttcttttttgtcagttacatcatcatatccttcctggttgtggtgaacatg
tatattgcagtcatcctggagaacttcagtgttgctactgaagaaagtgcagagcccctg
agtgaggatgactttgagatgttctatgaggtttgggagaagtttgatcccgatgcaacc
cagttcatggaatttgaaaaattatctcagtttgcagctgcacttgaacctcctctcaat
ctgccacaaccaaacaaactccagctcattgccatggatttgcccatggtaagtggtgac
cggattcactgtcttgatatcttatttgcttttacaaagcgggttctaggagagagtgga
gagatggatgcccttcgaatacagatggaagagcgattcatggcttccaatccttccaag
gcctcctatcagccaatcactactactttaaaacgaaaacaagaggaagtatccgctgtt
attattcagcgtgcttacaggcgccaccttttaaagagaactgtaaaacaagcttccttt
acatacaataaaaacaaaatcaaaggtggggctaatcttcttataaaagaagacatgata
attgatagaataaatgaaaactctattacagaaaaaactgatctgaccatgtccactgca
gcttgtccaccctcctatgaccgggtgacaaagccaatcgtggaaaaacatgagcaagaa
ggcaaagatgaaaaagccaaagggaaataa
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integrated database retrieval system
