Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101037097
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Entry
101037097 CDS
T04350
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03082
ATP-dependent chromatin remodeling
sbq04714
Thermogenesis
sbq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101037097 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101037097 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101037097 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbq03000
]
101037097 (ARID1A)
03021 Transcription machinery [BR:
sbq03021
]
101037097 (ARID1A)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101037097 (ARID1A)
Transcription factors [BR:
sbq03000
]
Eukaryotic type
Helix-turn-helix
ARID
101037097 (ARID1A)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101037097 (ARID1A)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101037097 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101037097
NCBI-ProteinID:
XP_010344071
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTIQGRAQSAMG
GLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHGQPSYQQQ
PQSQPPQLQPSQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ
QPQQPAPSSLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKG
GQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSP
HTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQ
SSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQY
GPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASM
GNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETVAMHVAANSIQNRPPGYPNMNQGGMM
ATGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNK
ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAV
GRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFE
CKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPT
PASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRM
SYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGP
YDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQRHDSYGNQFST
QGTPSGSPFPSQQTTMYPQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQL
PPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVS
APPGTSAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHG
VNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQV
SSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGS
VEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFN
LSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEE
EELLGPKLEEEEEEVVENDEEIAFSGKDKPASENSEEKLVSKFDKLPVKIVQKNDPFVVD
CSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELMPSRPHAPCPPAPRKHVATAE
GTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKFPFGISPA
QSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPG
LLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLAN
ISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLS
IQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIA
VQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDE
NHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcgcag
caacagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatatggg
tcccagaccccgcagcggtacccgatgaccattcagggccgggcgcagagtgccatgggc
ggcctctcttatacacagcagattcctccttatggacaacaaggccccagtgggtatggt
caacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcagcagcca
ccctactcccagcaaccaccatcccagacccctcatggccaaccttcatatcagcagcag
ccgcagtctcagccaccacagctccagccttctcagcctccatactcccagcagccatcc
cagcctccacatcagcagtccccaactccatacccctcccagcagtccacgacacagcag
cacccccagagccagcccccctactcacagccacaggctcagtctccctaccagcagcag
caacctcagcagccagcaccctcgtcgctctcccagcaggctgcatatcctcagccccag
tctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccacaggagcta
tctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaaggga
gggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgatctatct
ggttcaatagatgacctccctatggggacagaaggagccctgagtcctggagtgagcaca
tcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctctcct
catacctcccctcacctgcctggcatccgaggcccctccccgtcccctgttggctctccc
gccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccag
atgccacctcggccacccagtggccagtcagacagcatcatgcatccttccatgaaccaa
tcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccgcagtacagt
tccccccagcctggctcagccttatctccgcgtcagccttctggtggacagatacacaca
ggcatgggctcctaccagcagaactccatgggaagctatggtccccaggggggtcagtat
ggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaactac
cccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcagatgcatgga
cagcctggcatcccaccttacggcacactccctccagggaggatgagtcatgcctccatg
ggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcagggatg
tgtcccccaccagggggcatgaatcggaaaacccaagaaactgttgccatgcatgttgct
gccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggcatgatg
gcaactggacctccttatggacaagggattaatagtatggctggcatgatcaaccctcag
ggacccccatattccatgggtggaaccatggccaacaattctgcagggatggcagccagc
ccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaacaacaag
gcagatgggacacccaagacagaatccaaatccaagaaatccagttcttctactacaacc
aatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgggtg
gaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcctgctgtg
ggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggtggattg
actcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtgggcaca
tcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcctttgaa
tgcaagattgaacggggagaagatcctcccccagacatctttgcagctgctgattccaag
aagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatgcaggggccc
cagactcctcagtcaaccagcagttccatggcagaaggaggagacctaaagccaccaact
ccagcatccacaccacacagtcagatcccccccttgccaggcatgagcaggagcaattcg
gttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcggaattcc
atgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatggggcgcatg
tcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgatccc
ttcatgtcctcagggcagggccccaacggtgggatgggtgacccctacagccgtgctgct
ggccctgggcttggaaatgtggcaatgggaccacgacagcactatccctatggaggtcct
tatgacagagtgaggacggagcctggaatagggcctgagggaaacatgggcactggggcc
ccacaaccgaatctcatgccttccaacccagactcggggatgtattctcctagccgctac
cccccgcagcagcagcagcagcagcaacgacatgattcctatggcaatcagttctccacc
caaggcaccccttctggcagcccgttccccagccagcagaccacaatgtatccacagcag
cagcagaattacaagcggccaatggatggcacatacggccctcctgctaagcggcatgaa
ggggagatgtacagcgtgccatacagcactgggcaggggcagcctcagcagcagcagttg
cccccagcccagccccagcctgccagccagcaacaagctgcccagccttcccctcagcaa
gatgtatacaaccagtatggcaatgcctatcctgccactgccaccgctgctactgagcgc
cgaccagcaggcggcccccagaaccaatttccattccagtttggccgagaccgtgtctct
gcaccccctggcaccagtgcccagcaaaacatgccaccacaaatgatgggcggccccata
caggcatcagctgaggttgctcagcaaggcaccatgtggcaggggcgtaatgacatgacc
tataattatgccaacaggcagagcacgggctctgccccccagggccccgcctatcatggc
gtgaaccgaacagatgaaatgctgcacacagatcagagggccaatcacgaaggcccgtgg
ccttcccatggcacacgccagcccccatatggtccctctgctcctgtgccccccatgaca
aggccccctccatctaactaccagcccccaccaagcatgcagaatcacattcctcaggta
tcaagccctgctcccctgccccggccaatggagaaccgtacctctcctagcaagtctcca
ttcctgcactctgggatgaaaatgcagaaggcaggtcccccagtgcctgcctcgcacata
gcacctgcccctgtgcagccccccatgattcggcgggatatcaccttcccgcctggctct
gttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatgaaagacattgga
accccggaggcatggcgagtaatgatgtccctcaagtctggtctcctggctgagagcaca
tgggcattagataccattaacatcttgctatatgatgacaacagcatcatgaccttcaac
ctcagtcaactcccagggttgctagagctccttgtagaatatttccgacgatgcctgatt
gagatctttggcattttaaaggagtatgaggtgggtgatccaggacagagaacgctattg
gatcctggaagattcagcaaggtgtctagtccagctcccatggagggtggggaagaagaa
gaagaacttctgggtcctaaactagaagaggaagaagaggaagtagttgaaaatgatgag
gagatagccttttcgggcaaggacaagccagcttcagagaatagtgaggagaagctggtc
agtaagtttgacaagcttccagtaaagatcgtacagaagaatgacccatttgtggtggac
tgctcagataagcttggccgcgtgcaggagtttgacagtggcctgctgcactggcggatt
ggtggtggggacaccactgagcatatccagacccactttgagagcaagacagagctgatg
ccttcccggcctcatgcaccctgcccaccagccccccggaagcatgtggcaacagcagag
ggtacgccagggacaacagaccaggaggggcccccgcctgatggacctccagaaaaacgg
atcacagccactatggatgacatgttgtctacccggtctagcaccttgactgaggatgga
gctaagagttcagaggccatcaaggagagcagcaagtttccatttggcattagcccagca
cagagccaccggaacatcaagatcctagaggacgaaccccacagtaaggatgagacccca
ctgtgtacccttctggactggcaggattctcttgccaagcgctgcgtctgtgtctccaat
accattcgaagcctgtcatttgtgccaggcaatgactttgagatgtccaaacacccaggg
ctgctgcttatcctgggcaagctgatcttgctgcaccacaagcacccagaacggaagcag
gcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaacaaagtg
gagtggtggtgggactgcttggagatgctccgggaaaacaccttggttacactcgccaac
atctcggggcagttggacctatccccataccccgagagcatttgcctgcctgtcctggac
ggactcctacactgggcagtttgcccttcagctgaagcccaggaccccttctccaccctg
ggccccaacgccgtcctttccccgcagagactggtcttggaaaccctcagcaaactcagc
atccaggacaacaatgtggacctgattctggccacacctcccttcagccgcctggagaag
ttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccggtgtgccgggagatg
gctgtggtactgctggccaacctggctcagggggacagcctggcagcccgtgccattgca
gtgcagaagggcagtatcggcaacctcctgggcttcctagaggacagccttgccgccaca
cagttccagcagagccaggccagcctcctccacatgcagaacccaccctttgagccaact
agtgtggacatgatgcggcgcgctgcccgcgcgctgcttgccctggccaaggtggatgag
aaccactcagagtttactctgtacgaatcacggctgttggacatctcggtatcaccgttg
atgaactcactggtttcacaagtcatttgtgatgtactgtttttgattggccagtcatga
DBGET
integrated database retrieval system
