Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101037141
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Entry
101037141 CDS
T04350
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101037141 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbq03041
]
101037141 (DDX42)
Enzymes [BR:
sbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101037141 (DDX42)
Spliceosome [BR:
sbq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101037141 (DDX42)
Complex B
101037141 (DDX42)
Complex C
U2 SnRNP specific factors
101037141 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
101037141
NCBI-ProteinID:
XP_003942489
UniProt:
A0A2K6U3C5
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAKGIPGFSNSGNISGAPVTYPS
AGAQGVNNTASGNNSREGTGGGNGKRERYTENRGSSRHSHGETGNRHGDSPRHGDGGRHG
DGNRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESKKEACNRESKMEPKVD
SSKMDKADSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggtcctggcactaagcggggatttggctttggaggttttgcc
atcagtgctgggaaaaaggaggaacccaaactcccacagcagtcccacagtgcctttggg
gcaaccagttcttcttctggatttggaaagtcagctccaccacagctcccttctttctac
aaaattggatctaaacgggccaactttgatgaagaaaatgcctattttgaagacgaggaa
gaagactctagcaatgttgatttaccttacattcctgctgaaaactcaccaactcgccag
caattccattccaagccggtagattctgacagtgatgatgatcccttggaggcattcatg
gctgaagtcgaggatcaggcagctagagacatgaagaggcttgaagaaaaggacaaagaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggtgtggttcaggaggaagaggaagacaat
ctagaatatgatagtgatggaaatccgattgcacctaccaaaaaaatcattgatcctctt
ccccccatcgatcattcagagattgactatccaccatttgaaaaaaatttttacaatgag
catgaagagataaccaacctcactccacagcagttaatagatctccgccataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagctttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatctgaatacacacagcccactccaatacaa
tgccagggcgtgcctgtggcattaagtggtagagatatgattggtattgccaaaacaggt
agtgggaaaactgcagcctttatttggcccatgttgattcatataatggaccagaaggag
ttggaaccaggtgatggaccaattgcagtgattgtgtgtcctaccagggagctttgccag
cagatccatgcagagtgtaagcggtttggaaaagcatataatcttcgatcagtggccgtg
tatggaggagggagcatgtgggaacaggccaaagcccttcaggaaggggcagagattgtc
gtgtgtaccccaggtcgactgattgatcatgtgaaaaagaaagctaccaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccag
gttcgatccatagcaagtcatgttcgtcctgacagacagactctcctattcagtgcaact
tttcggaaaaagattgaaaagttggccagagacatcttgatcgaccctattcgagtggtg
cagggagatattggagaggcaaatgaagatgtgacacagattgtggagattctccattct
ggacctagtaaatggaactggcttaccaggcgtctggtggagtttacctcttcagggagt
gtcctcctctttgttactaagaaggccaatgctgaagagctagccaataaccttaagcag
gagggtcataatcttgggctgctccatggggacatggatcagagtgagagaaataaggtc
atttcagactttaagaaaaaggacatcccagtcctggtggccacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
acccacactcataggattggccgcacaggaagagcgggtgagaaaggtgtggcctatacc
ctactcactcccaaggacagcaattttgctggtgacctggtccggaacttggaaggtgcc
aatcaacatgtttctaaggaactcctagatctggcaatgcagaatgcctggtttcggaaa
tctcgcttcaaaggaggaaaaggaaaaaagctgaacattggtggaggaggcctaggttat
agggagcggcctggcctgggctctgagaacatggaccgaggaaataacaatgtaatgagc
aattatgaggcctacaagccttccacaggagctatgggagatcgactaacagcaatgaaa
gcagctttccagtcacagtacaagagtcacttcgttgcagccagtttaagtaatcagaag
gctggaagctctgctgctggggcaagtgggtggactagtgcagggagcttgaattctgtt
cctactaactcagcacaacagggccataacagtcctgacagccccgtcaccagtgccaag
ggcatcccaggctttagcaatagtggcaacatcagtggtgcccctgtgacctacccatct
gccggagcccagggagtcaacaacacagcttcagggaataacagccgagaagggactggg
ggtggcaacgggaaaagagagagatatactgagaaccggggcagcagccgtcacagtcac
ggagagactggcaatcggcatggcgacagcccacgtcacggagatggtggtcgccatgga
gatggaaaccgccacccagaaagcagcagtcgtcatactgatggccatcggcatggggag
aacaggcatggaggaagtgcaggccggcatggggagaaccggggtgcaaatgatggtcgg
aatggggaaagcaagaaagaagcttgtaatcgtgagagcaagatggagcccaaggtggac
agcagcaagatggacaaggcggacagcaagacagataagacagctgatggctttgctgtc
ccagagccacctaaacgcaagaaaagtcgatgggacagttag
DBGET
integrated database retrieval system
