Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101037169
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Entry
101037169 CDS
T04350
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03020
RNA polymerase
sbq03420
Nucleotide excision repair
sbq05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101037169 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
101037169 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101037169 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbq03021
]
101037169 (POLR2A)
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101037169 (POLR2A)
Enzymes [BR:
sbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101037169 (POLR2A)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101037169 (POLR2A)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101037169 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101037169
NCBI-ProteinID:
XP_003929214
UniProt:
A0A2K6RYV7
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctcgggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctgagcccggatgaactgaagcgaatgtctgtgacggagggtggt
atcaaatacccggagacgactgagggaggccgccccaagcttggggggctgatggatcca
agacagggggtgattgagcggactggccgctgccaaacatgtgcaggaaacatgacagag
tgtcctggccactttggccacattgaactggccaagcctgtgtttcacgtgggctttctg
gtgaagacaatgaaagttttgcgctgtgtctgcttcttctgctccaaactgcttgtggac
tctaacaacccaaagatcaaggacatcctggccaaatccaagggacagcccaagaagcgg
ctcacacatgtctacgacctttgcaagggcaaaaacatctgcgagggtggggaggagatg
gacaacaagttcggtgtggaacagcctgagggtgacgaggatctgaccaaagagaagggc
catggtggctgtgggcggtaccagcccaggatccgacgttctggcctggagctatatgcg
gaatggaagcatgttaatgaggactctcaggagaagaagatcctgctgagtccagagaga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagccc
cgctatgcgcggccagagtggatgatcgtcacagtgctgcctgtgcccccactctccgtg
cggcctgctgttgtgatgcagggctctgcccgcaaccaggatgacctgactcacaaactg
gctgacattgtgaagatcaacaatcagctgcggcgcaacgagcaaaatggtgcagcggcc
catgtcattgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcctaccccgtgccatgcagaagtctgggcgtcccctcaagtctctgaag
cagcggttgaagggcaaggaaggccgggtgcgggggaacctgatgggcaaacgagtggac
ttctcggcccgtactgtcatcacccccgaccccaacctctccattgaccaggttggcgtg
ccccgctccattgccgccaacatgacctttgcggagattgtcactcccttcaacattgac
agacttcaagaattagtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgagacaatggagatcggattgacttgcgttttcaccccaagcccagtgaccttcatctg
cagaccggctataaggtggaacgacacatgtgtgatggggacattgttatcttcaaccga
cagccgaccctgcacaagatgtccatgatggggcatcgggtccgcatcctcccctggtcc
accttccgcttgaatcttagtgtgacaactccatacaatgcagactttgatggggacgag
atgaacttgcacttgccacaatctctggaaacgcgggcagagatccaggagctggccatg
gttcctcgcatgattgtcacgccccagagcaatcggcctgtcatgggtatcgtgcaggac
acactgacagcagtgcgcaaattcaccaagagagatgtcttcctggagcggggtgaagtg
atgaacctcctgatgttcctgtcgacgtgggatgggaaggtcccacagccagccatccta
aagccccggcccctgtggacaggcaagcagatcttctccctcatcatacctggccacatc
aattgtatccgcacccacagcacccaccctgatgacgaagacagtggcccttacaagcac
atttctcctggggacaccaaggtggtggtggagaatggagagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcagctggctccctggtccacatctcctacctagagatg
ggtcatgacatcactcgcctcttctactctaacattcagaccgtcattaacaactggctc
ctcatcgagggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggca
cataataatgagctggagcccaccccagggaacactctgcggcagacttttgagaatcag
gtgaaccgcattcttaacgatgcccgagacaagaccggctcctctgctcagaaatctttg
tctgaatacaacaacttcaagtctatggtcgtgtccggagctaaaggttccaagattaac
atctcccaggtcattgctgtcgttgggcagcagaacgtggagggcaagcggattccattt
ggcttcaagcaccggactctgcctcacttcatcaaggatgactatgggcctgagagccgt
ggctttgtggagaactcctacctggccggcctcacacccaccgagttcttcttccatgcc
atggggggtcgtgaggggctcattgacacagctgttaagactgctgagactggatacatc
cagcggcggctgatcaagtccatggagtcagtgatggtgaagtatgatgcaactgtgcgg
aactccatcaaccaggtggtacagctgcgctacggcgaagatggcctggcgggtgagagc
gttgagttccagaacctggctacgcttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcacgctgcaggaggacctggtgaag
gacgtgttgagcaatgctcatatacagaatgagttggagcgggaatttgagcggatgcgg
gaggatcgggaggtgctcagggtcatcttcccaactggagacagcaaggtcgtcctcccc
tgtaacctgctgcgcatgatctggaatgctcagaaaatcttccatatcaacccgcgcctt
ccctctgacctgcaccccatcaaagtggtagaaggagtcaaggaattgagcaagaagctg
gtgatcgtgaatggggatgacccactgagccggcaggcccaggaaaatgccacgctgctc
ttcaacatccacctgcgatccacattgtgttcccgccgcatggcggaggagtttcggctc
agtggagaggcctttgactggctgcttggggagattgagtccaagttcaaccaagccatt
gcccatcctggtgaaatggtgggagctctggctgcacagtcccttggagaacctgctacc
cagatgaccttgaacaccttccactatgctggtgtgtctgccaagaatgtgacactgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccttcgcttact
gtcttcctgttgggccagtccgctcgagatgctgagagagccaaggatattctgtgccgc
ctggagcatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacagtggtggcagaggatcaggagtgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatctcgccctggctgttgcgggtggagctggatcggaagcac
atgactgaccggaagctgaccatggagcagattgctgagaagatcaatgctggttttggt
gacgacttgaattgcatctttaacgatgacaatgcagagaagctggtgcttcgtattcgc
atcatgaacagcgatgagaacaagatgcaagaggaggaagaggtggtggacaagatggat
gatgacgtcttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaagatc
atcatcacggaggacggggagttcaaggccctgcaggagtggatcctggagacggacggt
gtgagcttgatgcgggtgctgagtgagaaggacgtggaccccgtgcgcaccacatccaat
gacatcgtggagatcttcacggtgctgggcattgaagccgtgcggaaggccctggagcgg
gagctgtaccatgtcatctccttcgatggctcctatgtcaattaccgacacttggctctc
ttgtgtgataccatgacctgtcgcggccacttgatggccatcacccgacacggagtcaac
cgccaggacacaggaccactcatgaagtgttcctttgaggaaacggtggacgtgcttatg
gaagcagccgcacatggcgagagcgaccccatgaagggggtctctgagaatatcatgctg
ggccagctggctccggccggcactggctgctttgacctcctgcttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcctgggggctgctggacccaccggc
atgttctttgggtcagcacccagtcctatgggtggaatctctcctgccatgactccttgg
aaccagggtgcaacccctgcctatggcgcctggtcccccagtgttgggagtggcatgacc
ccaggggcagctggcttctctcccagtgctgcgtctgatgccagcggcttcagcccgggt
tactcccctgcctggtctcccacaccaggctccccaggctccccaggtccctcaagcccc
tacatcccttcaccaggtggtgccatgtctcccagctactcaccgacgtcacctgcctat
gagccccgctctcctgggggctacacaccccagagtccctcttattctcccacttccccc
tcctactcccccacctctccatcctattctccaaccagtcccaactatagccccacatca
cccagctactccccaacatcacccagctactcaccgacctctcccagctattcacccacc
tctcccagctattcacctacctctcctagctattcacccacctctcccagctattcaccc
acttcccccagctactcgcccacctctcccagctactcacccacctctcccagctactca
ccgacatctcccagctactcaccaacttcacccagctattctcccacttcccccagctac
tcaccgacctctccaagttattcacctacctctcccagctactcacccacttctccaagt
tactcacccaccagcccgaactattctccaaccagtcccaattataccccaacatcaccc
agctacagtccaacatcacccagctattcacctaccagtcccaactacacacctaccagc
cctaactacagcccaacctctccaagctactctccgacgtcacccagctactccccaacc
tcaccaagttattccccttccagcccacgatacacaccacagtctccaacctatacccca
agctcacccagctacagccccagctcgcccagctacagcccaacctcacccaaatacacc
ccaaccagtccttcctacagtcccagctccccagaatataccccaacttctcccaagtac
tcgcctaccagtcccaaatactcacccacctctcccaagtactcacctaccagccccacc
tattcacccactaccccgaagtactccccaacttcccctacttactccccaacctctcca
gtctacaccccgacttcccccaagtactcgcctactagccccacttactcgcccacttcc
cccaagtattcaccgaccagccccacctactcgcccacctccccgaaaggctcgacctac
tctcctacttcccctggctactcacccaccagccccacctacagcctcaccagcccggcc
atcagcccagatgacagtgacgaggagaactga
DBGET
integrated database retrieval system
