Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101037629
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Entry
101037629 CDS
T04350
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101037629 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbq01009
]
101037629 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbq04515
]
101037629 (PCDH1)
Protein phosphatases and associated proteins [BR:
sbq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101037629 (PCDH1)
Cell adhesion molecules [BR:
sbq04515
]
Cadherins
Protocadherins
101037629 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101037629
NCBI-ProteinID:
XP_003920588
UniProt:
A0A2K6V4U2
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MGGSCSRPARPLTGSSSWGRHGCYTQLWMRFRDLSLWSWGSVLGLTALVENRVSVGEALL
ILAPARMGPLRRSPGPGGQRLLLSSMLLAVLLLLAPSPGHATRVVYKVLEEQPPNTLIGS
LAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGEPCILEF
EVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRD
AGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGG
SPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIE
YTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVT
VKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEQTAVALVQVSDRDEGENAAVTCVVAG
DVPFQLRQASETGSDSKKKYFLQTTTPLDYEKAKDYTIEIVAVDSGNPPLSSTNSLKVQV
VDVNDNAPVFTQSVTEVAFPENNKPGEVIAEVTASDADSGSNAELVYSLEPEPAAKGLFT
ISPETGEIQVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSG
YNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDRE
QQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNASHRLLTPQTRLGETV
SQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSD
RGKPPRYGTALVHLYVNETLANRTLLDTLLGHSLDTPLDIDIAGDPEYERSKQRGNILFG
VVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKS
KSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLP
SIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPH
RRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDG
SIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFV
PYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQT
SDFPPAATPASAQTAKREIYL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggagctgctctagacctgccaggcctcttactggctcctccagctggggcaga
cacggctgctacacccagctgtggatgagattcagggatttgagtctctggagttggggc
tctgtgctgggactgactgcccttgtggagaatcgtgtgtcagtgggagaggccctcctg
attctggcgcctgccaggatggggcccctgaggcgcagcccgggccctggggggcaacgg
ctactgctgtcttccatgcttctagcagtgctgctcctgctggctccatccccaggccac
gccactcgggtagtatacaaggtgctggaggaacagccgcccaacaccctcatcgggagc
ctcgcagccgactatggttttccagatgtggggcacctgtacaagctagaggtgggtgcc
ccataccttcgcgtggatggcaagacaggtgacattttcaccactgagacctccatcgac
cgtgaggggctccgtgaatgccagaaccagctccctggtgagccctgcatcctggagttt
gaggtgtctatcacagaccttgtgcagaacggcagcccccggttgctagagggccagata
gaagtacaagacatcaacgacaacacacctaactttgcctcaccagtcatcactctggcc
atccccgagaacaccaatatcggctcactcttccccatcccgctggcttcagatcgtgat
gctggtcccaacggcgtggcatcctatgagctgcaggccgggcctgaagcccaggagcta
tttgggctgcaggtagcagaggaccaggaggagaagcaaccacagctcattgtgatgggc
aacctggaccgtgagcgctgggactcctacgacctcaccatcaaggtgcaggatggcggc
agccccccacgtgccagcagtgccctgctgcgtgtcaccgtgctcgacaccaatgacaac
gcccccaaatttgagcggccctcctatgaggccgaactatctgagaatagccccataggc
cactcggtcatccaggtgaaggccaatgactcagaccaaggtgccaatgcagagattgaa
tacacgttccaccaggcgcccgaagttgtgaggcgtcttcttcgactggacagaaacact
ggacttatcactgttcagggccccgtggaccgtgaggacttaagcaccctgcgcttctca
gtgcttgctaaggaccgaggcaccaaccccaagagtgcccgtgcccaggtggttgtgacc
gtgaaggacatgaatgacaatgcccccaccattgagatccggggcataggactggtgacc
catcaagatgggatggctaacatctcagaagatgtggcagagcagacagctgtggccctg
gtgcaggtatctgaccgagatgagggagagaatgcagctgtcacctgtgtggtagcaggt
gatgtgcccttccagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtat
ttcctgcagaccaccaccccactggactacgagaaggccaaagactacaccattgagatt
gtggctgtggactctggcaaccccccactctccagcaccaattccctcaaggtgcaggtg
gtggatgtcaatgacaatgcacctgtcttcactcagagtgtcactgaggtcgccttccca
gaaaacaacaagcctggtgaagtgatcgctgaggtcactgccagtgatgctgactctggc
tctaatgctgagctggtttattctctggagcctgagccggctgctaagggcctctttacc
atttcacctgagactggagagatccaggtgaagacatctctggatcgggaacagcgggac
agctatgagttgaaggtggtggcagctgaccggggcagccctagcctccagggcacagcc
actgtccttgtcaatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggc
tacaacttctcagtgatggagaacatgccagcgctgagtccagtgggcatggtgactgtc
attgatggagacaagggggagaatgcccgggtgcagctctcagtggagcaggacaatggt
gactttgttatccagaatggcacaggcaccatcctctccagcctgagcttcgatcgagag
caacaaagcacctacaccttccagctgaaggcggtggatggtggcgtcccacctcgctca
gcgtatgttggtgtcaccatcaatgtgctagacgagaatgacaacgcaccctatatcact
gctccttctaacgcctctcaccggctgctgaccccccagacacgtcttggtgagacggtc
agccaagtggcagccgaggactttgactctggtgtcaatgctgagctgatctacagtatc
gcaggtggcaacccttacggactcttccagattggatcacattcaggtgccatcaccctg
gagaaggagattgagcggcgccaccatgggctacaccgcctggtggttaaggtcagtgac
cgtggcaagcccccacgctatggcacagccttggtccacctttatgtcaatgagactctg
gccaaccgcacgctgctggacaccctcctgggccacagcttggacacgccactggatatt
gacatcgctggagatccagaatacgagcgctccaagcagcgtggcaacattctctttggt
gtggtggccggtgtggtggccgtggccttgctcatcgccctggcggttcttgtgcgctac
tgccggcagcgggaggccaagagtggttaccaggctggtaaaaaggagaccaaggacctg
tacgcccccaagcccagtggcaaggcctccaagggaaacaaaagcaagggcaagaagagc
aagtccccgaagcctgtgaagccagtggaggatgaggatgaggccgggctgcagaagtcc
ctcaagttcaacctgatgagcgatgcccctggggacagtccccgaatccacctgcccctc
aactacccaccgggcagccctgacctgggtcgccactaccgctctaactccccactgcct
tccatccagctgcagccccagtcaccctcggcctccaagaagcaccaggtggtacaggac
ctgccacctgcaaacacattcgtgggcaccggggacaccacgtccacgggctctgagcag
tactccgactacagctaccgaaccaacccccccaaataccccagcaagcagttacctcac
cgccgcgtcaccttctcagccaccagccaggcccaggagctgcaggacccatcccagcac
agttactatgatagtggcctggaggagtctgagacaccatccagcaagtcatcctcgggg
cctcgactcggtcccctggccctgcctgaggatcactatgagcgcaccacccctgacggc
agcataggagagatggagcaccccgagaatgaccttcgccctttgcctgatgtcgccatg
acaggcacatgtacccgggagtgcagcgagtttggccactctgacacatgctggatgcct
ggccagtcatctcccagccgccggaccaagagcagcgccctcaaactctccaccttcgtg
ccttaccaggaccgaggagggcaggagcctgcgggcgccggcagccccagccccccggaa
gaccggaacaccaaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccac
agtagccatgattcctgcaaggactcggccaccttggaggaaatccccctgacccagacc
tcggacttcccacccgcagccacaccggcatctgcccagacggccaagcgcgagatctac
ctgtga
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integrated database retrieval system
