Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101038701
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Entry
101038701 CDS
T04350
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04820
Cytoskeleton in muscle cells
sbq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101038701 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101038701 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101038701 (COL24A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101038701 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
DUF29
Motif
Other DBs
NCBI-GeneID:
101038701
NCBI-ProteinID:
XP_010348833
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
MHLGAHRTRRGKVSPTAKTKAFLHFIVLCVAGVVHAQERGIDILHQLGLGGKDVRHSSSV
TAVPSSSTPLPQGVRLTQLGVILKNDAYIESPLMKILPVNLGQPFTILTGLQSHRVNNAF
LFSIRNKNRLQLGVQLLPKKLVVHIGGKQPVVFSYSVHDEQWHSFAVTVGNQVVSMFVEC
GKKYFSTETISEVQSFDSNSVFTLGSMNNNSVHFEGIVCQLDIIPSAEASADYCRYMKEQ
CRRADKHQPETSLPCTTLIPTKIPEHSPLPKGFAEKVLSEDSFTQDKSIPNIINNDSETV
YKRQEHSISRSQLTSLHSGNVSAVDLTNLGIQAKEMITEKDTQTNLSLSVTPHHLSEARM
NTKKKFNSLLNVSGNITQHDDRVTGLSLFKKMPSILPQIKQDTMTNLKKAITANLHTNEL
TEMQQILNTTLYRETNEPSVDNHLDKRKEGEFYPEATYPIENSYETELYDYYYYYEDLNT
MLEMEYLRGPKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPG
FSPGQAIPGEKGDQGLFGLIGPPGMQGAKGLKGHPGLPGLRGEKGIPGLAGNVGSPGYPG
RQGLAGPEGNPGPKGVRGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRG
PAGLDGSPGLVGGTGPLGFPGLRGSVGPVGPIGPPGIPGPVGLSGNKGLPGIKGDKGEQG
TAGELGEPGYPGDKGAIGLPGPPGVRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPG
QNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKG
EVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPG
PIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGPHGLTG
KTGNPGERGVQGKPGLQGLPGSTGDRGLAGEPGLRGLQGDVGPPGEMGIEGPPGIEGESG
LQGEPGAKGDIGLGGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGIPGEDGEKG
EMGLPGIIGPLGRSGQMGLPGPEGIVGILGQRGRPGKKGDKGQVGPMGEVGSKGFPGKVG
KSGPKGARGTRGAVGHLGLMGPEGEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL
GPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGDAGDQGEQGLKGEK
GSEGHKGKKGAPGPSGKPGIPGLQGPPGPKGIQGYHGADGISGHPGKVGSPGKQGLPGIR
GSPGRTGLAGAPGPPGVKGSSGLPGSPGVQGPKGEQGLQGQPGIQGKRGRRGEQGDQGPC
GEPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRVSGKSFCLSRNC
GSLLTGPQGPRGQPGPPGPPGAPGPRKQMDISAAIQALIESNAALQMESYQNTEVTLIDH
SEEIFKTVNYLSNLLHSIKNPLGTRDNPARICKDLLNCEQKVSDGKYWIDPNLGCPSDAI
EVFCNFSAGGQTCLPPLSVTKLEFGVGKVQMNFLHLLSSEATHIITIHCLNTARWTSTQT
SDPGLPIGFKGWNGQIFKVNTLLEPKVLSDDCKIQDGSWHKATFLFNTQEPNQLPVIEVQ
KLSHLKTERKYYIESSSVCFL
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagcccacaggacaaggcgtggaaaagtctcccccacggcaaaaacgaaa
gcatttcttcattttatcgtactatgtgtagctggcgttgttcatgcacaagaacgaggc
atagatattcttcatcaactaggccttggaggcaaagatgtaagacactcatcatcagtg
actgctgtaccatcatcatctacaccattacctcagggggtccgtttaacacaattaggt
gtcattttaaaaaatgatgcttacatcgagtctcctctcatgaaaattttaccagtcaac
ttagggcagccatttacaatattaactgggttacagtcacatcgggtgaacaatgcattt
ctcttcagcattagaaataaaaatagactgcaactaggagtacagttactacctaaaaag
ttagtagtacacattggaggaaagcagcctgtagttttcagctacagtgttcatgatgag
caatggcactcatttgccgttactgttggaaatcaagttgtctcaatgtttgttgagtgt
ggaaagaaatattttagcacagagactatttcagaagttcagagctttgattctaatagt
gtatttaccttaggaagtatgaataataattctgtccattttgaaggaatagtatgtcag
ttagatattattccttctgcagaagcatctgcagactactgcagatacatgaaagagcag
tgtcgccgagcagacaaacaccaacctgaaacaagccttccttgcacgactctcatacca
actaagataccagaacattctcccctgcccaaaggatttgctgaaaaagtactgtcagag
gattcatttactcaagacaaaagcattccaaatatcataaataatgattctgaaaccgtg
tataagagacaagaacactcgatatcaagatcgcagttaacttctcttcattcaggaaat
gtctctgctgtggatctcacaaaccttgggattcaggccaaagaaatgatcactgagaaa
gatactcagacaaatttaagcctgtcagtgacccctcatcaccttagtgaggcaagaatg
aataccaagaagaaatttaattctctcttaaatgtatctggcaatatcacgcaacatgat
gatagagtaactggtctgtcactgtttaagaagatgccatctattcttccacaaataaaa
caagatacaatgactaatctcaagaaggctatcacagcaaatctgcacactaatgaactc
acagaaatgcaacagattttaaacacaacattgtatagagagacaaatgagccatctgtg
gataatcaccttgataaaaggaaagaaggtgaattttatcctgaagctacatatcccatc
gaaaatagctatgaaactgagctttatgattattattattattatgaggatctaaataca
atgctcgaaatggagtatctgagagggccaaaaggagacactggacctcccggtccaccc
ggtccggcaggtatcccaggtccgtcagggaagagaggtccacggggcataccagggcca
catggaaatcctgggttacctggattacctggtccaaagggtcccaaaggagatccagga
ttttccccaggtcaagccattcctggagaaaagggtgatcaaggcctttttggattaata
ggcccccctggtatgcaaggtgctaagggtctcaaaggacatcctggactcccaggactt
cgaggtgaaaaaggaattccaggattggctggtaatgttggttcacccggttaccctggc
aggcagggtttagctggaccagaaggtaatccaggtcctaaaggtgtacgaggttttatt
ggctctcctggagaagcaggacaactgggacctgaaggagaaaggggcattcctgggatc
cgtggaaagaaaggttttaaggggagacagggttttccaggtgactttggagacagaggc
cctgctggtcttgatggcagtcctggacttgtaggtggcactggtcctctggggtttcct
gggcttagaggcagtgttggccctgtgggaccaatcggacctcctggaattcctggccca
gtgggcctttcagggaataaaggactacctggaatcaaaggtgataagggtgaacaaggc
actgcaggagagctaggagaaccagggtatcctggagacaagggtgctattggtttgcca
ggaccaccaggggtgagaggaaagccaggaccttcaggccaaacaggtgacccaggactc
caaggaccatctggccctccaggaccagagggttttccaggagatattgggattcctgga
caaaacggccctgaaggaccaaagggactccttggaaatagagggcctcctggacctcct
ggcctcaaaggaactcagggagaagaaggaccaattggaccctttggggagctggggcca
agaggaaaacccggtcaaaaggggtatgcaggcgaaccaggaccagaaggcttaaaggga
gaagtaggagatcaaggaaatattggaaaaattggtgaaacaggacctgtaggcttacct
ggagaagttgggatgactggaagcattggtgaaaagggagaacgtggaagtccaggccca
ctaggtccccagggggaaaagggtgttatgggatacccaggtcctcctggggttccagga
cctatcggtccattgggattacctggtcatgtgggggcaagaggaccacctgggagtcaa
ggtcctaaaggacaaagaggaccaagaggaccagatggtctcttaggagagcaaggtata
cagggtgccaagggtgaaaaaggagttcaaggaaaaagagggcctcatggtcttactggt
aagactggaaaccctggagaaagaggagttcaagggaaacccggtttacagggattgcct
ggaagtacaggtgacagaggacttgcaggagaaccaggactgcgaggactgcaaggtgat
gttggacctcctggagaaatgggcattgagggacctccaggcattgagggagagtctggt
ctgcaaggcgagccaggtgcaaagggagatattggacttggaggcagtgttggaggaact
ggggaaccagggttacggggtgagccaggagctcctggagaagaaggtcttcaaggaaaa
gatgggttaaagggagttccaggaggaaggggaattcctggagaggatggagaaaaagga
gagatgggcttaccaggaattatagggcccttgggtagatcaggccaaatgggccttccg
gggcctgaaggaattgtggggattctagggcaaagaggtcgtccagggaaaaagggtgat
aagggacaagtaggacccatgggagaagttggaagcaaaggttttcctggaaaagttgga
aaaagtggtcctaagggtgccagaggaacgagaggtgctgtgggacatttaggattgatg
ggacctgagggagaaccaggaattccagggtacaggggccatcagggtcaaccaggactc
tctgggttgccaggacctaaaggagaaaagggctatccaggagaagatagcacagtccta
ggaccacctggacctcgaggtgaaccaggtccagttggggaacaaggagagagaggagag
cccggagcagagggatataagggacatgtgggtgtgccaggactaagaggggccactgga
caacaaggacccccaggcgatgcaggtgaccagggtgaacaaggactgaaaggagagaaa
ggatctgaaggtcataaggggaaaaaaggagctcctggtccttctgggaaacctgggatt
cctggacttcaaggcccacctggaccaaaaggcatacaaggataccatggagcagatggc
atttcaggacaccctggaaaagttgggtcaccaggaaaacagggacttcctggcatcaga
ggcagcccaggaagaacaggccttgctggagctccaggtcctccaggagtaaagggttca
tcaggcttgccaggaagcccaggagttcaaggcccaaagggtgaacaagggctacagggt
caacctggaattcaaggtaaaagaggtcgccgaggagaacaaggtgatcaaggaccatgt
ggagagcctggcctgaaagggcagcctggagagtatggtgttcaaggtttgacaggtttc
caaggattcccaggccctaaaggtcctgaaggggatgctggcattgttggaatatcaggt
cctaaaggtcctattggacagagagtaagtggaaagtcattctgcctatccagaaattgt
ggttctttgcttactggtcctcaagggccgagaggtcaaccagggcctccaggcccacct
ggagcaccaggcccaagaaaacaaatggatatcagtgctgctattcaagccttgattgaa
tcaaatgctgccctacagatggagagctaccagaataccgaagtgactttaattgaccac
agtgaagagatattcaaaaccgtgaactaccttagcaatttattgcacagcatcaagaat
cctcttggcacacgagataacccagcacgaatctgcaaagatttactgaactgtgaacaa
aaagtatcagatggaaaatactggattgatccaaatcttggctgtccttcagatgccatt
gaggttttctgcaattttagtgctggtggccagacatgcttacctcctctttctgtaaca
aagttggagtttggagttggcaaagtccagatgaacttccttcatttactgagttcagaa
gccacccatattatcaccattcactgtctaaacactgcgaggtggacaagcacacaaaca
agtgacccaggattgcctattggtttcaagggatggaatggccagatttttaaagtaaac
actctacttgaacctaaagtgctttcagatgactgcaagattcaagatggcagctggcat
aaggcaacatttctttttaacacccaggaacctaatcaacttccagtgattgaagtacaa
aaactttctcatctcaaaactgagcgaaagtattacattgaaagcagttctgtatgcttt
ctgtaa
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integrated database retrieval system
