Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101039232
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Entry
101039232 CDS
T04350
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04611
Platelet activation
sbq04820
Cytoskeleton in muscle cells
sbq04926
Relaxin signaling pathway
sbq04933
AGE-RAGE signaling pathway in diabetic complications
sbq04974
Protein digestion and absorption
sbq05146
Amoebiasis
sbq05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101039232 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101039232 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
101039232 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
101039232 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
101039232 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
101039232 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101039232 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101039232 (COL3A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101039232 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
101039232
NCBI-ProteinID:
XP_003940885
UniProt:
A0A2K6UL84
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MMSFVQKGSWLLLALLHPTVILAQQEAVEGGCSHLGQTYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGVGGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAMGPSGPAGKDGESGRPGRPG
ERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGAPG
SSGAPGQRGEPGPQGHAGAQGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPPG
ANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGTPGIPGAKGEDGKDGSPGEPGANGLPG
AAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGPRGAAGEPGRDGLPGGPGMRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPAGKNGETGPQGPPGPTGPGGDKGDTGPPGPPGLQGLPGTGGPPGENGKPGEPG
PKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGPAGPPGPPGTAG
SPGLQGMPGERGGPGSPGPKGDKGEPGGAGADGVPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEPGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPG
VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPGGSPG
KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG
PPGMPGPRGSPGPQGVKGESGKPGVNGLSGERGPPGPQGLPGLAGAAGEPGRDGNPGSDG
LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPAGAPGPAG
ARGAPGPQGPRGDKGETGERGANGIKGHRGFPGSPGAPGSPGPAGHQGAIGSPGPAGPRG
PVGPSGPAGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGG
AAAIAGIGGEKAGGFAPYYGDEPMEFKINTDEIMNSLKSVNGQIESLISPDGSRKNPARN
CRDLNFCHPELKSGEYWIDPNQGCKLDAIKVFCNMETGETCISASPSNVPRKHWWTDSGA
EKKHVWFGESMDGGFQFSYGNPELPEDILDVQLAFLRLLSSRASQNITYHCKNSIAYMDQ
ASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLPI
VDIAPYDIGGPDQEFGVDVGPVCFL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggagctggctacttcttgctctgcttcatcccactgtt
attttggcacaacaggaagctgtcgaaggaggatgttcccatcttggccagacctatgcg
gatagagatgtctggaagccagaaccatgccaaatatgtgtctgtgactcaggatccgtt
ctctgcgacgacataatatgtgacgatcaagaattagactgccccaacccagaaattcca
ttcggagaatgttgcgcagtttgcccacagcctcccactgctcctactcgccctcctaat
ggccaaggacctcaaggccccaagggcgatccaggccctcctggtattcctgggagaaat
ggtgaccctggtattccaggacaaccaggttctcctggttctcctggcccccctggaatc
tgtgaatcatgccctactggtcctcagaactattctccccagtatgattcatatgatgtc
aagtctggagtagcagtaggaggagtcggtggctatcctgggccagctggacccccaggt
cctcctggtccccctggtacatctggtcatcctggttcccctggatctccaggataccaa
ggcccccctggtgaacctgggcaagctggtcctgcaggccctccaggacctcctggtgct
atgggtccatctggtcctgctggaaaagatggagagtcaggcagacccggacgacctgga
gagcgaggattgcctggacctccaggtattaaaggtccagctgggatacctggattccct
ggtatgaaaggacacagaggctttgatggacgaaatggagaaaagggtgaaacgggtgct
cctggcttaaagggcgaaaacggtcttccaggtgaaaatggagctcctggacccatgggt
ccaagaggggctcctggtgagagaggacggccaggacttcctggagccgccggtgctcgg
ggtaatgacggtgctcgaggcagtgatggtcaaccaggccctcctggtcctcctggaact
gccggattccctggatctcctggtgctaagggtgaagttggacctgcaggggctcctggt
tcaagtggcgcccctggacaaagaggagaacccggacctcagggacatgctggtgctcaa
ggtccccccggcccccctgggagtaacggtagtcctggtggtaaaggcgaaatgggtcct
gctggcatccctggagctccgggactgatcggagccaggggccctccaggaccacccggt
gctaatggtgctcctggactgcgaggtggtgcaggtgagcctggtaagaatggtgccaaa
ggagagccaggaccacgaggtgaacgcggtgaggctggtactccaggtattccaggagct
aaaggtgaagatggcaaggacggatcacctggagaaccaggtgcaaatgggcttccagga
gctgcaggagaaaggggtgcccctgggttccgaggccctgctggaccaaatggtgttcca
ggagaaaagggccccgctggagagcgtggtgctccaggacccgccgggcccagaggggca
gctggagaacctggcagagatggtctccccggaggtccaggcatgaggggcatgcccgga
agtccaggaggaccaggcagtgatgggaaaccagggcctccgggaagtcaaggagaaagt
ggtcgaccaggtcctcctggaccatctggtccccgaggtcagcctggtgtcatgggcttt
cccggtcctaaaggaaatgatggtgcccctggtaagaatggagaacgaggtggccctgga
ggacccggccctcagggtcctgctggaaagaatggcgaaacaggacctcagggaccccca
gggcccactgggcctggtggtgacaaaggagacacaggaccccctggtccaccgggatta
caaggcttgcctggaacaggtggtcctccaggagaaaacggaaaacctggggaaccaggt
ccaaagggtgatgctggtgcacctggagctccaggaggcaagggtgatgctggtgcccct
ggagaacgcggacctcctggactggcaggggccccaggacttagaggcggggctggtcct
cctggtcccgaaggaggaaagggacccgctggtcctcccgggccacctggtactgctggt
agtcctggtctgcaaggaatgcctggagaaaggggaggtcctggaagtcctggtccaaaa
ggcgacaagggtgaaccaggcggtgcaggtgctgatggtgtcccagggaaagatggtccg
aggggtcctactggtcctattggtcctcctggtccagctggccagcctggagacaagggt
gaaggtggtgcccccgggcttccaggtatagctggacctcgtggtggccctggtgagaga
ggcgaacctggccctccaggacctgctggcttccctggtgctcctggacaaaatggtgaa
cctggtggtaaaggagaaagaggggctccaggtgagaaaggcgaaggaggccctcctgga
gtcgcaggaccccctggaggttccggacctgccggtcctcctggtccccaaggtgtcaaa
ggtgaacgtggcagtcctggtggacccggtgctgctggcttccctggtgctcgtggtctt
cctggtcctcctggtagtaacggtaacccaggacccccaggtcccggcggttctccaggc
aaggatgggccccccggtcctgcgggtaacactggtgctcctggcagccccggagtgtct
ggaccaaaaggtgatgctggccaaccaggagagaagggatcacctggtgcccagggcccc
ccaggagctccaggcccacttggaattgctgggattacaggagcacggggtcttgcagga
ccaccaggcatgccaggtcctcggggaagccccggccctcagggcgtcaagggtgaaagt
gggaaaccaggtgttaatggtctcagtggagaacgtggtccccctggaccccagggtctt
cctggtctggctggtgcagctggtgaacctggaagggatggaaaccctggatctgatggt
cttccaggccgagatggatctcctggtggcaagggtgatcgtggtgaaaacggctctcct
ggtgcccctggagctcctggtcatccaggcccacccggtcctgtcggtccatctggaaag
agtggtgacagaggagaaactggtcctgctggccctgctggtgctcctggtcctgctggc
gcaagaggtgctcctggtcctcaaggcccacgtggtgacaaaggggagaccggcgaacgt
ggcgctaacggcatcaaaggacatcgaggattccctggcagcccaggtgccccagggtcc
ccaggtcctgctggtcaccagggtgccatcggtagtccaggacctgcaggccccagagga
cctgttggacccagtgggcctgctggcaaagatggaaccagtggacatccaggtcccatt
ggaccaccagggcctcgaggtaacagaggtgaaagagggtctgagggctccccaggccac
ccagggcaaccaggcccccctggacctcctggtgcccctggtccttgctgtggtggtgga
gccgctgccattgctgggattggaggtgaaaaagctggtggttttgccccatattatgga
gatgaaccaatggaattcaaaatcaacaccgatgagattatgaattcactcaagtctgtt
aacggacaaatagaaagcctcattagtcctgacggttctcgtaaaaaccctgctagaaac
tgcagagacctgaatttctgccatcctgaactcaagagtggagaatattggattgacccg
aaccaaggatgcaaattggatgctatcaaggtattctgtaatatggaaactggggaaaca
tgtataagtgccagtccttcgaatgttccgcggaaacactggtggacagattctggtgct
gagaagaaacacgtttggtttggagagtccatggatggtggttttcagtttagctatggc
aatcctgaacttcctgaagatatccttgatgtgcagctggcattccttcgacttctctcc
agccgagcctcccagaacatcacatatcactgcaaaaatagcattgcatacatggatcag
gccagtggaaatgtaaagaaggccctgaggctgatggggtcaaatgaaggtgaattcaag
gctgaaggaaatagcaaattcacctatacagttctggaggatggttgcacgaaacacact
ggggaatggagcaaaacagtctttgagtaccgaacacgcaaggccgtgagactacctatt
gtagatattgcaccctacgacattggtggtcctgatcaagaatttggtgtggacgttgga
cctgtttgctttttataa
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integrated database retrieval system
