Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101039628
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Entry
101039628 CDS
T04350
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbq03000
]
101039628 (SOX6)
Transcription factors [BR:
sbq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101039628 (SOX6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101039628
NCBI-ProteinID:
XP_010345733
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MSSKQATSPFACAADGEDAMTQDLTSREKEESSDQHVASHLPLHPIMHNKPHSEELPTLV
NTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
DNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPT
GIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNK
SSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMR
EQIQREHQQQQPHGVDGKLSSINNMGLNNCRNEKERTRFENLGPQLTGKSNEDGKLGPGV
IDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNA
FMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPN
YKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAI
TMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDAGSLAGNEMINGEDEMEMYDDY
EDDPKSDYSSENEAPEAVSAN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccacctctccatttgcctgtgcagctgatggagaggatgcgatg
acccaggatttgacctcaagggaaaaggaagagagcagtgatcaacatgtggcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtc
aataccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggaa
tcagagaataataagttatgttccctatattccttccgaaatacctctacctcaccacat
aagcctgacgaagggagtcgggaccgcgagataatgaccagtgttacttttggaacccca
gaacgccgcaaagggagtcttgctgatgtggtggacacactgaaacagaagaagcttgag
gaaatgactcggactgaacaagaggattcctcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaataccagtgaactccttggagaaattaaaggtaca
cctgagagcctggcagaaaaagaacggcagctctccaccatgattacccagctgatcagt
ttacgggagcagcttctggcagcacatgatgaacagaaaaaactggcagcctcacaaatt
gagaaacaacggcagcaaatggaccttgctcgccaacagcaggaacagattgcaagacaa
cagcagcaacttctgcaacagcagcacaaaattaatctcctgcagcaacagatccaggtt
cagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggaccctggca
gcagctgctgctgcccaacagggattcctcttcccccctggaataacatacaaaccaggt
gataactaccctgtacagttcattccatcaacaatggcagctgctgctgcttctggactc
agccctttacagctccagcagctctatgccgctcagctggccagcatgcaggtgtcacct
ggagcaaagatgccatcaactccacagccaccaaacacagcagggacggtctcacctact
gggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaagcagca
gcacagcctctgaatctctcatcccgacccaagacagcagagcctgtaaagtccccaacg
tctcccacccagaacctgttcccagccagcaaaaccagccctgtcaacctgccaaacaaa
agcagcatccctagccccattggaggaagcctgggaagaggatcctctttaggtaaatgg
aaaagtcaacaccaggaagagacttacgaattagatatcctgtctagtctcaactcccct
gccctgtttggggatcaggatacagtgatgaaagccatccaggaggcacggaagatgcga
gagcagatccagcgggagcaccagcagcaacagccacacggtgttgatgggaaactgtcc
tccataaataatatggggctgaacaactgcaggaatgaaaaggaaagaacacgctttgag
aatctggggccccagttaacaggaaagtcaaatgaagatggaaaactgggcccaggtgtc
atcgatctcactcggccagaagacgcagagggaagtaaagcaatgaatggctctgcagct
aaactacagcagtattattgttggccaacaggaggtgccactgtggctgaagcacgagtc
tacagggatgcccgcggccgtgccagcagtgagccacacatcaagcgaccaatgaatgca
ttcatggtttgggcaaaggatgagaggaggaaaatccttcaggccttccccgacatgcat
aactccaacattagcaaaatcttaggatctcgctggaaatccatgtccaaccaggagaag
caaccttattatgaagaacaggcccggctaagcaagatccacttagagaagtacccaaac
tataaatataaaccccgaccgaaacgcacctgcattgttgatggcaaaaagctccgaatt
ggggagtataagcaactgatgaggtctcggagacaggagatgaggcagttctttactgtg
gggcaacagcctcagattccaatcaccacaggaacaggtgtggtgtatcctggtgctatc
acgatggcaactaccacaccatcacctcagatgacatctgactgctctagcacctcggcc
agccccgagcccagcctcccggtcatccagagcacttatggtatgaagacagatgccgga
agcctagctggaaatgaaatgattaatggagaggatgaaatggaaatgtatgatgactat
gaagatgaccccaaatcagactatagcagtgaaaatgaagccccggaggctgtcagtgcc
aactga
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