Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101039991
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Entry
101039991 CDS
T04350
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101039991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101039991
03041 Spliceosome [BR:
sbq03041
]
101039991
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101039991
Spliceosome [BR:
sbq03041
]
Complex B
Other components
Prp19-related factors
101039991
Complex C
101039991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
101039991
NCBI-ProteinID:
XP_010350189
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MSDSILSDPNFYPQVFHVSQLRLIYIKVEGLAPGEPQGFILMACGLTFHFFWCPLAPRVQ
FANQVMEAERRDEGKEGGQQMLNDGDEDLDADEWPIDLRNRVAGEAQIQQFWDVASPNSP
PQHLHFPPLSYVTLTSHGSSCDVVKSSESRTEDGKPRSFHGVQLLPCLVSRHEHRRRTRG
AEAEPSHGPGDVRPNKISFYLKPFSFAEVWKLLIFSVSDRVEEWVRLFAVVRLRDPELFL
GTADSPLEEQSKELIDSRSIMATELRLEEKNPGRDPQPGLKQWGPYVTCPGGIKCTRRRP
LLLNSILLRQNPHHVHKWHKPVALHQGRPREIINTFTEAVQMVGPCKATGKPHTLWVAFA
KFHEDNRQLDDACVILEKATKVNLKQVDDLASLRCRCGELELRHQNYDEALRLLWKATAL
PACRAEYFDGSEPVQNRVYKSLKVWSMLSDLEESLGTFQSTKAVYDRIPDLRIAAPQIVI
NDAMFLQEHKYFEESFKAHERSIPLFTRPNVSEIWSTYLTKFVARYGGRKLERARDLFEQ
ALDGCPPKDAKTLYLLYAQLEEEWGLARHAMTRAVEAEQQHDTFNICIKRAAKIYGVTHT
RGIYQKAIEVLSDEHAPEMYLRFADMGCKLGQINRTGAIYSFCXKICNPRMTGAFWQTWK
DFEVRHGKEDTIKEMLRIQRSVQATYNTQVNAMASQMLKVSGSTMGTVSNLAPGQRGMDD
MKLLEQRAEQLAAEVERDQTLCAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEMDL
EPNEVQLEQQSVPAAVFGSLKED
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcatcctgagtgaccctaacttctatccccaggtcttccacgtcagtcag
ctgaggcttatctacatcaaagtggagggactggccccaggggagcctcagggcttcatc
ttgatggcctgcggcctcacattccactttttctggtgccctctggctcccagagtccag
tttgccaatcaagtgatggaggctgaaaggagggatgaggggaaggaggggggtcagcaa
atgctaaatgatggggatgaggatcttgatgcagatgaatggcccattgacttaaggaat
cgtgtggctggagaggcccagatccagcagttctgggatgttgcttcaccaaacagcccc
ccacagcatctccatttcccacctctgtcttacgtgacactgacatctcacggctcctcc
tgtgatgtggtgaaatcttctgagtcaaggactgaggacgggaagccacgttccttccat
ggagtccagctactgccctgccttgtttccagacatgagcacaggagacgcacacgagga
gcagaggctgagccctctcatggcccaggagatgtgaggccaaacaagatctctttctat
ctgaaaccattcagttttgcagaggtgtggaagttgctgatatttagtgtgagtgaccgt
gtggaggaatgggtccgcttatttgctgttgtaaggttgcgggatcccgagctgttcctt
ggaacagctgattctccgttagaggagcagtccaaagagctcattgactcaaggagcatc
atggcaactgagctgcgcttggaggagaagaatccagggcgtgatccacaaccaggcctg
aagcagtggggcccatatgtgacctgtccaggaggtattaaatgcacgaggaggaggccc
ctgctcctcaacagcatcctgctgcgccagaacccacaccacgtgcacaagtggcataag
cctgttgccctgcaccagggccgcccccgggagatcatcaataccttcacagaggctgtg
cagatggtgggcccctgcaaggccacaggcaaaccccacactctgtgggtggcatttgcc
aagtttcatgaggacaacaggcagctggacgatgcctgtgtcatcctggagaaggccacc
aaggtgaacttgaagcaggtggatgacctggcaagcctacggtgtcggtgcggggagctg
gagctccggcaccagaactatgacgaggccctgcggctgctgtggaaggccacggcgctg
cctgcctgccgggccgagtacttcgacggctcagagcccgtgcagaaccgcgtgtacaag
tcactgaaggtgtggtccatgctctccgacctggaggagagcctcggcaccttccagtcc
accaaggccgtgtacgaccgcatcccggacctgcgcatcgcagcaccccagatcgtcatc
aacgacgccatgttcctgcaggagcacaagtacttcgaggagagcttcaaggcgcacgag
cgcagcatccccctgttcacgcggcccaatgtgtcggaaatctggagcacctacctgacc
aaattcgtcgcccgctacgggggccgcaagctggagcgggcacgggacctgttcgaacag
gctctggacggctgcccaccaaaagacgccaagaccttgtacctgctgtacgcgcagctg
gaggaggagtggggcctggcccggcacgccatgaccagggccgtggaggctgagcagcag
cacgacacattcaacatctgcatcaagcgggctgccaagatctacggggtcacccacacc
cgcggcatctaccagaaggccatcgaggtgctgtcggacgagcatgcacctgagatgtac
ctgaggttcgcggacatggggtgcaagctggggcagatcaaccgcaccggggccatctac
agcttctgtnccaagatctgcaacccccggatgaccggagcgttctggcagacgtggaag
gactttgaggtccggcacggcaaggaggacaccatcaaggagatgctgcgcatccagcgg
agcgtgcaggccacatacaacacgcaggtcaacgccatggcctcgcagatgctcaaggtc
tcgggcagcaccatgggcaccgtgtccaacctggcccctgggcagagaggcatggatgac
atgaagctgttggaacagcgtgcggaacagctggcagccgaggtggagcgagaccagacc
ctgtgtgcccagagcaagatcctgttcgtgaggagcgacgcctccagggaggagctggca
gagctggcacagcaggtcaaccccgaggagatccagctgggcgaggacgagatggacctg
gaacccaacgaggtccagctagagcagcagagcgtgccagctgctgtgttcgggagcctg
aaagaagactga
DBGET
integrated database retrieval system
