Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101041402
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Entry
101041402 CDS
T04350
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04518
Integrin signaling
sbq04974
Protein digestion and absorption
sbq05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101041402 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101041402 (COL2A1)
04518 Integrin signaling
101041402 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101041402 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101041402 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101041402 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101041402 (COL2A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101041402 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
101041402
NCBI-ProteinID:
XP_003941493
UniProt:
A0A2K6V0T4
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDDKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGNPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAAGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPSGPAGARGIPGPQGPRGDKGEAGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGGLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcagggccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagccggagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcagccctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggcaacca
ggaccaaaggggcagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggggaacaaggacccagaggggatcgtggtgacaaa
ggtgaaaaaggtgcacctggacctcgtggcagagatggagaacctgggacccctggaaat
cctggcccccctggccctcctggcccccctggcccccctggtcttggtggaaactttgct
gcccagatggctggaggatttgatgacaaggctggtggtgctcagatgggagtaatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgcaggtgctcccgggcct
caaggatttcaaggcaatcctggtgaacctggtgaacctggcgtctctggtcccatgggt
ccccgtggtcctcctggtccccctggaaagcctggtgatgatggcgaagctggaaaacct
ggaaaagctggtgaaagaggtcctccaggtcctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttatccaggcctggacggtgctaaggga
gaggcgggcgcccctggtgtgaagggtgagagtggttcccccggcgagaacggttctccg
ggcccaatgggtcctcgtggtctgccaggtgaaagaggacggactggccctgctggtgct
gcgggtgcccggggcaacgatggtcagccaggccctgcagggcctccgggtcccgtcggt
cctgctggtggtcctggcttccctggtgctcctggagccaagggtgaagctggccccact
ggtgcccgtggtcctgaaggtgctcaaggtcctcgtggtgaacccggtactcctgggtcc
cctgggcctgctggtgcctctggtaaccctggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcctggcttccctgggccacggggtcctcct
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccctgctggcccccaggga
gcccctggacccgctggtgaagaaggcaagagaggtgcccgtggagagcctggtggcgtt
gggcccattggtcctcccggagaaagaggtgctcctggcaaccgcggtttcccaggtcaa
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggc
cccaagggagccaatggtgaccctggccgtcccggagaacctggccttcctggagcccgg
ggtctcactggccgccctggtgatgctggtcctcaaggcaaagttggcccttctggggcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggtgagcctggcaaagctggtgagaag
ggactgcctggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgcc
gctggaccccctggccctgcaggacctgctggtgaacgaggcgagcaaggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccctggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggcaatcctggtgcccagggcctccagggtccccgtggc
ctccccggcactcctggcactgatggtccgaaaggtgcatctggcccagcaggcccccct
ggggctcagggccctccaggtcttcagggaatgcccggcgagaggggagcagctggtatt
gctgggcccaagggtgacaggggtgatgttggtgagaaaggtcccgagggagcccctgga
aaggatggtgggcgaggtctgacaggtcccattggcccccctggcccggctggtgctaac
ggtgagaagggagaagttggacctcctggtcctgcaggaagtgctggtgctcgtggcgct
ccgggtgaacgtggagagactggaccccctggaccagcaggatttgctgggcctcctggt
gctgatggccagcctggggccaagggtgagcaaggagaggctggccagaaaggtgacgct
ggtgcccctggtcctcagggcccctctggagcgcctgggcctcagggtcctactggagtg
actggtcctaaaggagcccgaggtgcccaaggtcccccgggagccacaggattccctgga
gctgctggccgcgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggtccccctggccga
gctggtgaccccggcctccaaggtcctgctggaccccctggcgagaagggagagcctgga
gatgacggcccctctggtgccgatggtccaccaggtccccagggtctggctggtcagaga
ggcatcgtcggtctgcctgggcagcgtggtgagagagggttccccggcttgcccggccca
tcgggcgagcccggcaagcagggcgctcctggagcatctggagacaggggtcctcctggc
cccgtgggtcctcctggcctgaccggtcctgcaggtgaacctggacgagagggaagcccc
ggtgccgatggtcctcctggcagagatggcgcggctggagtcaagggtgatcgtggcgag
actggtgccgcgggagctcctggagcccctgggccccctggctctcctggacccgctggt
ccaactggcaagcagggagacagaggagaagctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggaatcccgggccctcaaggcccccgcggtgacaaaggagag
gctggagagcctggcgagagaggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcctggcccccctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgttggtccctctggcaaagatggtgctaatggaatc
cctggtcccattgggcctcctggtccccgtggacgatcaggcgaaaccggccccgctggt
cctcctggaaatcctggaccccctggtcctccaggtccccctggccctggcatcgacatg
tctgcctttgctggccttggccagagagagaagggccccgaccccctgcagtacatgcgg
gccgaccaggcagccggtggcctgagacagcatgacgctgaggtggatgccaccctcaag
tccctcaacaaccagatcgagagcatccgcagccccgagggctcccgcaagaatcctgcc
cgcacctgccgagacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggctgcaccttggatgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagccaacgttcccaaaaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccacggaaggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gatgaagcagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag
atccgggcagagggcaatagcaggttcacgtacactgccctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactgtcatcgagtaccggtcacagaagacctcacgcctc
cccatcattgacattgcacccatggacataggagggcccgagcaggaattcggtgtggac
atagggccagtctgcttcttgtaa
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integrated database retrieval system
