Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101042346
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Entry
101042346 CDS
T04350
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101042346 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbq03041
]
101042346 (SF3B1)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101042346 (SF3B1)
Spliceosome [BR:
sbq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101042346 (SF3B1)
Complex B
101042346 (SF3B1)
Complex C
U2 SnRNP specific factors
101042346 (SF3B1)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101042346 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
101042346
NCBI-ProteinID:
XP_003925748
UniProt:
A0A2K6SFZ4
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caagaaatttatggtggaagtgacagcagatttgctggatacgtgacatcaattgctgca
acagaacttgaagatgatgacgatgactattcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgccccggtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgcagaccgagaagatgaatacaaa
aagcataggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcac
ttgactaaagaagaacgagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcggcagcatcccagcctccgtcaaaacgaaaaaggcgttgg
gatcaaacagctgatcagactcctggtgccactcccaaaaagctatcaagttgggatcag
gcagagaccccggggcatactccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaacgccaggctcaaaaatatgggatcctacacctagccac
acaccagcaggagctgctactcctggacgaggcgatacaccaggccatgccacaccaggc
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgaaacccccaaaacagag
agagacactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattctattggtgaaacaccgactcctggagccagtaaaagaaaatcacggtgggatgaa
acaccagctagtcagatgggtggaagcactccagttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggaaagagaaattgatgagagaaatcgaccactttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagctactccgacacctttgggtggt
atgactggtttccacatgcaaactgaagatcgaactatgaaaagtgttaatgaccagcca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaactactggtt
gatgttgatgaatctacacttagtccagaagagcaaaaagagagaaaaataatgaagtta
cttttaaaaattaagaatggaacaccaccaatgagaaaggctgcgttacgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaagatcaagagcgtcatttacttgtgaaagttattgacaggatactg
tacaaacttgatgacttggttcgtccgtatgtgcataagatcctcgtggtcattgaaccg
ctattgattgatgaagattactacgctagagtggaaggccgagagatcatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgagtatgtccgtaacacaacagctcgagcttttgctgttgtggcctctgccctgggc
attccttctttattgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacaacagatagctattcttatgggctgtgccatcttg
ccacatcttagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaag
gttcggaccatcagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtcttaaagcctttatggaagggtatccgccaacacagagga
aagggtttagctgctttcttaaaggctatcgggtatcttattcctctcatggatgcagaa
tatgcgaactactatactagagaagtgatgttaattcttattcgagaattccagtctcct
gatgaggaaatgaagaaaattgttctgaaggtagtaaaacagtgttgtgggacagatggt
gtagaagcaaactatattaaaacagagattcttcctccattttttaaacacttctggcag
cacaggatggctttagatagaagaaattaccgacagttagttgatactactgtggagctg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaggatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaatttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacaaactacagaggactcagtaatgttgaatggctttggcacagtggtgaatgcc
cttggcaaacgagtcaaaccatacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatctgcaaaagttaggcaacaggcagctgacttgatttctcgaactgctgtt
gttatgaagacttgtcaagaggaaaaattgatgggacacttgggtgttgtattgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtcataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
acccccatcttaaagaacagacatgaaaaagtacaagagaattgtattgatcttgttggg
cgtattgctgacaggggagctgaatatgtatctgcaagagaatggatgaggatttgcttt
gagcttttagagcttttaaaagcccacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttctaaacaac
ctcaaagttcaagaaaggcagaacagagtttgtaccactgtagcaatagctattgttgca
gaaacgtgttcaccctttacagtactccctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggataga
gaccttgtacacagacagacagctagtgcggtggtacagcacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggccaaatgtgttt
gagacatctcctcatgtaattcaggcagttatgggagccctggagggcctgagagttgct
attggaccatgtagaatgttgcaatattgtttacagggtctgtttcacccagcccggaaa
gtcagagatgtatattggaaaatttacaactccatctacattggttcccaagacgctctc
atagcacattacccaagaatctacaacgatgataagaacacctatattcgttatgaactt
gattatatcttataa
DBGET
integrated database retrieval system
