KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101042678
Entry
101042678         CDS       T04350                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbq03400]
    101042678 (MDC1)
DNA repair and recombination proteins [BR:sbq03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101042678 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 101042678
NCBI-ProteinID: XP_010330943
LinkDB
Position
Unknown
AA seq 1649 aa
MEDTQAIDWDIEEEEETEQSCESLGCNPEPVGRLRIFSGAHGPEKDFPLYLGKNVIGRMP
GCSVALPFPSISKQHAEIEISAWDKAPILRDSGSLNGTQILRPPKVLIPGVSHRLRDQEL
ILFADLPCQYRRVDVPLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDSLSERCV
VKKSRTTSSSMGMIVPDSDEEGNSPVLGGPGLPFAFNLSSDTDPENQQLATEEASSAARR
GAAIEPEQSEAEVTTEIQLEKKQPSVKERDDDTEVKRGAGNGIVPAGVMLEKSQSPAEDS
DTDVDDDSRPPGRPAEVRLERVQPLGFIDSDTDVEEQGIPATLTVVPMKKRKIFHGVGIR
GPGGPGLAHLQESQAGSDTDTEEGKAPQAAPLEKSQASMVINSDTDDEEEVSAALTLARL
KESQPALWNRDAEEDMAQPVVLLQRSQTTTGRDSDTDVEEEELPVENREALPEGHTKIRA
LVRAHSGKNEPSFRDSVKSVEADKSSPGIHLERSQASTTVDINTQVEESAMVSMQGTNQT
DVEAGGGPEKLLVVSLEEAWPPPHGDCETDAEEDTSLAASAVADILKIWTYKLPNAFWRE
RTSFSLSFFFSLSLLPGSLDEPWEVLATQPFCLRESKDSETQPFDTHLEACGSCLSPPRA
IPGDQHPESPVHTEPMGIQGREMQTVDKDMGIPKERMAPERAPLERETEKLLPERQTDVT
GEEELTRGIQDREQKQLLARDSQRQESGKKEESASPKRDRESLKVEIEISEEIQEKEVEK
QTLPSKTIEREVERPVADRECEPAELEGKVPKVILERGTQRREPEGRSQDQKRQASSPTL
EPGVGAREFPESVSAPIPSGSQSGGRGSPVSPRRHQKGLNCKMPPAEKASRIRAAKKASR
VRAAFSTSSYSASLLYILSMLPHLASLVPIASELQASVSTDQPITPEPTSQATRGRKNRS
SVKTPGTVVPIASELQASASTDQPVTPEPTSQATRGRRNRSSVKTPETVVPIASELQASA
STDQPVTPEPPSRTSRGRTNRSSVKTPESVVPTAPELQPSTSTDQPVTPEPTSQTTRGRT
NRSSVKTLKSVPTAPELQVSTSTDQPVTPEPASRTTRGRTNRSSVKTPESAVPIAPELQP
STSTDQPVTPEPTSRATRGRTNRSSVRTPEPVIPTAPEPLPTTSIDQPVTPKPKSRATRG
RVNRSSVKTPKPVEPAASNLEPLIPTDQPVTPEAIAQGGQSKTLRSSIVSAVSVPTTPEF
RSPVTTDQPISPEPIPQASCSKRQRVIGNPGSLKAPIDRKPCSAPLEPKSWASRNQRWGA
VRETESLTAITEPASPQLLETLTHASQIQKVEARGRSTFTPEPQPKASQSRKRPFATMDS
QPLQKQPQREEVSQKTVFLKEELEDTTKWPGKEEDVMTPKPGKRKRDQAEEEPNRIQSRS
LRRTKLTQESTAPKVLFTGVVDAQGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCA
LGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYE
IHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQRVVITCPQDFPRCSVPRRVGLPLL
SPEFLLTGVLKQEAKPEAFVLSPLEMSST
NT seq 4950 nt   +upstreamnt  +downstreamnt
atggaggacactcaggctattgactgggacattgaagaagaggaggagacggagcaatcc
tgtgaatccttggggtgtaacccagagccagtagggcggctacgtatctttagtggtgcc
catggaccagaaaaagatttcccactataccttgggaagaatgtgataggccgaatgcct
ggctgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaaatc
tcagcctgggacaaggcacctatcctccgagactctgggagccttaatggtactcaaatc
ctgaggcctcctaaggttttgattcctggggtgagtcaccgtctgagggaccaggaattg
attctctttgctgacttgccctgccagtaccgtcgcgtggatgtccccctgccctttgtc
tcccggggccctctgactgtagaagagacacccagggtacagggaggaactcaaccccag
aggcttctgttggctgaggactcagaggaggaagtagattctctttctgaaaggtgtgtg
gtaaaaaaatcaaggacgacatcttcctccatgggaatgatagttccagacagtgatgaa
gaggggaattcccctgtcctgggtggccctgggctgccttttgccttcaatttgagcagt
gacacagatccagaaaatcagcaactagccacagaggaggcctcctcagctgccagaaga
ggtgctgctatagagccagagcagtctgaagctgaagtcacaactgaaatccagcttgaa
aagaagcagccttcagtgaaggagagggatgatgacacagaagtcaagaggggtgcaggg
aatgggattgttccagctggggtgatgctggagaagagccaatctcctgcagaggacagt
gacacagatgtggatgatgacagcaggcctcctggaaggccagctgaggtccgtttagaa
agggttcagcctcttggcttcattgacagtgacactgatgtagaagaacaggggatccca
gcaaccctaactgtagttcctatgaagaagaggaagatcttccatggagttggtataagg
ggtcctggaggaccagggctggcccatctgcaggagagtcaggctggtagtgatacagat
acggaggagggcaaggccccacaggctgcccctcttgagaaaagccaagcttccatggtg
atcaatagtgatacagatgatgaggaagaagtctcagcagcgctgactttagcacgtctg
aaagagagtcaacctgctctatggaacagagatgcagaagaggacatggcccaacctgtg
gtccttctccagagaagccaaaccaccactgggcgagacagtgacacagatgtggaggag
gaagagctcccagtggaaaatagagaagctctccccgagggtcacacaaagattagagcc
cttgttagagcacattcaggaaaaaacgagccttcatttagggacagtgttaagagtgtg
gaagcagataagagttcacctgggatccacctggagagaagccaagcctccaccacagtg
gacatcaacacacaagtggaggagtcagccatggtgtctatgcaggggacaaatcaaaca
gatgtggaagcaggtgggggaccagaaaagctgcttgtggtatctctagaggaagcctgg
cctcctccacatggggactgtgaaacagatgcagaggaggacacctccttggcagcctca
gcagttgcagatattctgaagatctggacctacaagctacccaatgctttctggagagag
agaacctccttctctctctctttctttttctctctctctttacttccaggtagcctagat
gaaccatgggaggtcctggctacacagccattctgtctgagagagtccaaggactctgag
acccagccttttgacacccaccttgaggcctgtggatcttgcctgtctccacctagggca
ataccaggagaccaacatccagagagcccagtccacacagagccaatggggattcaaggc
agagagatgcagactgtggataaagatatgggtataccaaaagaaaggatggcccctgag
agagcgccattggagagggaaactgagaaactgctgccagaaagacagacagatgtgaca
ggagaggaagaattaaccagggggatacaggacagagaacaaaaacagttgttagctaga
gacagtcagagacaagaatctggcaaaaaggaggaaagtgcaagtcctaaaagagatagg
gagagtttgaaggtagaaattgagatatctgaggaaatacaggagaaagaagtagagaag
cagacccttccaagcaaaacaattgagagagaagtagagagaccagtagcagacagagag
tgtgagccagctgagttagaagggaaggtgcccaaagtgatcctggagagaggcacacag
agaagggagccagagggaaggagccaggaccagaaacggcaggcctccagcccaacactg
gagcctggggtgggggcaagggagtttccagaatctgtctcagcccccataccttctggg
agccagtcaggtggaaggggatccccagtgagccccaggaggcatcagaaaggcctgaat
tgtaagatgccacctgctgagaaggcttccaggatcagagctgctaagaaagcttccagg
gtgagagctgctttttctacctcctcctactctgcaagtcttctctatatcctctcaatg
ctccctcatctagcctcacttgtccccatagcctctgagctccaggcctctgtgtccaca
gaccagcctatcacccctgagcccacatctcaggccactaggggaagaaaaaataggtcc
tctgtcaagacccctggaacagttgtccccatagcctctgagctccaggcctccgcgtcc
acagaccaacctgtcacccctgagcccacatctcaggccactaggggaagaagaaatagg
tcctctgtcaagacccctgaaacagttgtccccatagcctctgagctccaggcttctgcc
tccacagaccagcctgtcacccctgagcccccatctcgaaccagtaggggcagaacaaac
aggtcctctgtcaagacccctgaatcagttgtacccacagcccctgagctccagccttcc
acctccacagaccagcctgtcacccctgagcccacatctcagaccactaggggcaggaca
aataggtcctctgttaaaacccttaaatctgtacccacagcccctgagctccaggtttcc
acctccacagatcagcctgtcacccctgagcctgcatctcggaccactaggggcaggaca
aataggtcctctgtcaagacccctgaatcagctgtccctatagcccctgagctccagcct
tccacctccacagaccagcctgtcacccctgagcccacatctagggccactaggggcagg
acgaataggtcctctgtcaggacccctgaaccagttatccccacagcccctgagcccctt
cctacaacctctatagaccagcctgtcacccctaagcccaaatctagagccactagagga
agggtaaataggtcctctgtcaagactcccaaaccagttgaaccagcagcctctaatctt
gagcctcttatccccacagaccagcctgtcacccctgaggccatagctcagggtggtcag
agtaaaacactgaggtcttccatagtaagtgctgtgtcagttcctaccacccctgaattc
cggtcccctgttaccacagaccagcctatttcccctgagcctattcctcaagccagttgc
agcaagaggcagagagtcattgggaatcctggctccctcaaagctcccattgaccgtaag
ccttgctctgcacccctggaacctaaatcctgggcttcaaggaaccaaagatggggagca
gttagagaaactgaatcccttacagccattactgagcctgcctctccccagcttcttgag
acactaactcatgcctcccagatccaaaaggtggaagcaagaggtagatctacgtttacc
ccagagccccagcctaaggcctctcaaagccgcaagaggccttttgctaccatggattca
cagccacttcaaaaacagccccaaagagaagaagtctcccagaagacagtgtttctcaag
gaagagttagaagacactacaaagtggccagggaaagaagaggatgtcatgactccaaaa
ccaggcaagagaaagagagaccaggcagaggaggagcccaacagaatacagagccgcagc
ctccgacggaccaaacttacccaggaatcaacagcccccaaagtgctcttcacaggcgtg
gtggatgcccagggagagcgggccgtgctggcactggggggaagtctggctggttcagcg
gcagaggcttcccacctggtcactgatcgtatccgccggacagtcaagttcctgtgtgcc
ctggggcgaggaatccccattctctccctggactggctgcatcagtcccgcaaggctggt
tgcttcttacccccggatgaatatgtggtgactgaccctgagcaagagaagaactttggc
tttagccttcaagatgccctgagccgggcgcgggagcgaaggctgctggagggctatgag
atccatgtgacccctggagtccagccaccaccacctcagatgggagagatcatcagctgc
tgtggaggcactgtcctacccagcatgcctcggtcctataagcctcagagagttgtgatc
acatgcccccaggacttccctcgatgctctgttccacgacgggttgggctgcccctcctc
tctcctgagttcctgctgactggagtgctgaagcaggaagccaagccagaggcctttgtc
ctttcccctttggagatgtcatccacctga

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