Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101044013
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Entry
101044013 CDS
T04350
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq01524
Platinum drug resistance
sbq03430
Mismatch repair
sbq05200
Pathways in cancer
sbq05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101044013 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101044013 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
101044013 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
101044013 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101044013 (MSH2)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101044013 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
101044013
NCBI-ProteinID:
XP_010332042
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKT
QGVIKYMGPAGEDRDGECWGGTRGLWRDSIPASESGRRTASPAWGRDVGAPALASPGNLS
QFEDVLFGNNDTSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEA
LLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITEKKKADFSTKDIYQDLNRLLKGKK
GEQMNSAVLPEMENQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER
SFYLFYYFLLGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFD
PNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN
NKNFTTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTL
NDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDV
YFEKNKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG
DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG
AFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELAN
FPKHVIECAKQKALELEEFQYIGESQGYDNMEPATKRCYLEREQGEKIIQEFLSKVKQMP
FTEMSEENITIKLKQLKAEVIAKNNSFVNEIISRIKVTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttctttcaaggcatgccggaaaagccgaccactacggtgcgccttttcgaccggggc
gacttctatacggtgcacggcgaggacgcgctgctggcggcccgggaagtgttcaagacc
cagggggtgatcaagtacatggggccggcaggtgaggaccgggacggcgagtgctgggga
gggacccggggcttgtggcgcgactccattcccgcctcggaaagtgggcggcgaacagcc
tctccagcatgggggcgggacgttggtgccccggcgctcgcttctcctggcaatctgtct
cagtttgaagacgttctcttcggtaacaatgatacgtcagcttccattggtgttgtgggt
gttaaaatgtccacagttgatggccagagacaggttggagttggctatgtggattccata
cagaggaagctaggactgtgtgaattccctgataatgatcagttctccaatcttgaggct
ctcctgatccagattggaccaaaggaatgtgttttacctggaggagagactgctggagac
atggggaaactgaggcagattattcaaagaggaggaattctgatcacagaaaaaaaaaaa
gctgacttttccacaaaagacatttatcaggacctcaaccggttgttgaaaggcaaaaag
ggagaacagatgaatagtgctgtattgccagaaatggagaatcagggttctgttgaagat
accactggctctcagtctctggctgccttgctgaataagtgtaaaaccccccaaggacaa
agacttgttaaccagtggattaagcagcctcttatggataagaacagaatagaggagagg
tctttttatttgttttactactttcttttaggaaaacaccagaaattgttgttggcagtt
tttgtgactcctcttactgatcttcgttctgatttctccaagtttcaggaaatgattgaa
acaactttagatatggatcaggtggaaaaccatgaattccttgtaaaaccttcatttgat
cctaatctcagtgaattaagagaaataatgaatgacttggaaaagaagatgcagtcaaca
ttaataagtgcagccagagatcttggcttggaccctggcaaacagattaaactggattcc
agtgcacagttcggatattactttcgtgtaacctgtaaggaagaaaaagtccttcgtaac
aataaaaactttactactgtagatatccagaagaatggtgttaaatttaccaacagcaaa
ttgacttctttaaatgaagaatataccaaaaataaaacagaatatgaagaagcccaggat
gccattgttaaagaaattgtcaatatttcttcaggctatgtagaaccaatgcaaacactc
aatgatgtgttagctcagctagatgccgttgtcagttttgctcatgtgtcaaatggagca
cctgttccatatgtacgaccagtcattttggagaaaggacaaggaagaatcattttgaaa
gcatccaggcatgcttgtgttgaagttcaggatgaagttgcgtttattcctaatgatgta
tactttgaaaaaaataaacagatgttccacatcattactggccccaatatgggaggtaaa
tcaacatatattcgacaaactggggtgatagtacttatggcccaaattgggtgctttgtg
ccatgtgagtcagcggaagtgtccattgtggactgcatcttggcccgagtaggggctggt
gacagtcaattgaaaggagtctctacattcatggctgaaatgttggaaactgcttctatc
ctcaggtctgcaaccaaagattcattaataataatagatgaattgggaagaggaacttct
acctatgatggatttgggttagcatgggctatatcagaatatattgcaacgaagatcggt
gctttttgcatgtttgcaacccattttcatgaacttactgccttggccaatcagatacca
actgttaataatctacatgtcacagcactcaccactgaagagaccttaactatgctttat
caagtgaagaaaggtgtctgcgatcaaagttttgggattcatgttgcagagcttgctaat
ttccctaagcatgtaatagagtgtgctaaacagaaagccttggaacttgaggagtttcaa
tatattggagaatcgcaaggatatgataacatggaaccagcaacaaagaggtgctatctg
gaaagagagcaaggtgaaaaaattattcaggagttcctgtccaaggtgaaacaaatgccc
tttactgaaatgtcagaagaaaacatcacaataaagttaaaacagctaaaagccgaggta
atagcaaagaataatagctttgtaaatgaaatcatttcacgaataaaagttactgtgtaa
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