Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101044032
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Entry
101044032 CDS
T04350
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbq03009
]
101044032 (IGHMBP2)
03012 Translation factors [BR:
sbq03012
]
101044032 (IGHMBP2)
Enzymes [BR:
sbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101044032 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
101044032 (IGHMBP2)
Ribosome biogenesis [BR:
sbq03009
]
Eukaryotic type
Other ribosome biogenesis factors
101044032 (IGHMBP2)
Translation factors [BR:
sbq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101044032 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
SMUBP-2_HCS1_1B
AAA_11
R3H
AAA_30
AAA_19
zf-AN1
DEAD
nSTAND3
AAA_16
ResIII
AAA_22
Helicase_RecD
IstB_IS21
Flavi_DEAD
UvrD-helicase
AAA_25
PhoH
SLFN-g3_helicase
AAA
DnaB_C
ABC_tran
Zot
NPHP3_N
DAP3
UvrD_C_2
NTPase_1
Amnionless
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
101044032
NCBI-ProteinID:
XP_010350298
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MASAAVESFVAKQLELLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTLEPRRCGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE
SHDFQLSLDRENSYRLLKLANDVTYKRLRKALTALKKYHSGPASSLIEVLFGRSAPSPAS
EIHPLTFFNTCLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC
CAPSNVAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDI
DQVFVGVVASVHVGCSLFPPGASGDGPLKLLPEGHFGMVVIDECAQALEASCWIPLLQAG
KCILAGDHKQLPPTVISHRAALAGLSLSLMERLADEYGERVVRTLTVQYRMHQAIMRWAS
EAMYLRQLTAHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPG
EVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLAHRYPELEIKSVDGFQGREKE
AVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQH
GEVRTAFEYLDDIVPENYSHESSQGPSHVATKTQGSAASARNGSQWQEGGQEAAAAARRG
RKKPAGKLLGPEAPSQPSLTGGSPEGVESQDGMDHFRALIAEFMASEKMQLEFPPSLNSH
DRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRALPAPRPPAVPRPPADPEPPAALGFLAG
TGGPAPLQPVPPSPVQTKQPPREQHGPEQPDLRTLHLERLQRVRGSQGQPSSKEQQASGQ
QKLPEKKKKKAKGHPAIELPTEEDFEALVSAAIKADNTCGFAKCTASVTTLGQFCHLCGR
RYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKDRSLDPAKRAQLQRRLDKKLG
ELSSQRTSRRKERGT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggaaagcttcgtggccaagcagctggagctactggagctcgag
agagacgcggaggtggaggagcgaaggtcctggcaggagaacatctccctgaaagagctc
cagagccgaggcgtgtgtttgctgaagctgcaggtgtccagccagcgcacggggctgtac
ggacggctgctggtgaccttggagcccaggcggtgcggttctgcggcagctcttcccagt
aacagcttcacttccggtgatatagtgggcctgtacgatgctgctaatgagggcagtcag
ctggccaccgggatcctgacccgagtcacccagaagtcagtcacggtggcctttgatgag
tcccacgatttccagttgagcttggaccgagagaattcctacagactgttaaaacttgcc
aatgatgtcacttacaagcgactgagaaaagctctgactgctctaaagaagtatcattct
ggcccagcctcctcactcatagaagtgctcttcggcagatctgctcccagtcctgccagt
gaaatacacccgctgacgttcttcaacacctgcctggacgcctcccagaaagaagcggtt
tcatttgcgctgtcgcagaaggaacttgccatcatccatggacctcctggcactgggaaa
accacgactgtcgttgagataattcttcaagctgtgaaacaaggcttaaaggttctgtgc
tgcgccccctccaacgtcgcagtggacaacctggtggagcgcctggctctgtgtaagcag
cggattctgcgcctggggcaccccgcccgcctcctggagtccattcagcaacactccctg
gatgcggttttagcacggagtgacagtgcccagattgttgccgatatcaggaaggacatc
gaccaggtctttgtaggtgtcgtggccagtgtccacgtggggtgctccctgtttccacca
ggtgcatctggcgacggccccctgaagctgctgcccgagggccacttcggtatggtggtc
atcgacgagtgcgcccaggccctggaggccagctgctggatccccctgctgcaggccggg
aagtgcatcctggcgggcgaccacaagcagctgccccccaccgtcatctctcacagggct
gcgctggcaggactgtcgctcagtctgatggagcgcctggccgatgagtatggcgagcgg
gtggtgcggacgctgaccgtgcagtaccgtatgcaccaggccatcatgcgctgggcctcg
gaagccatgtacctcaggcagctcacagcccacccttccgtggcggggcacctcctgagg
gacctcccaggtgtggctgccacggaggagacgggcgtgcccctgctcctggtggacacc
gccggctgcgggctgttcgagctggaagaggaggacgaacagtccaaagggaaccctggc
gaagtccgcctcgttagtctgcacatccaggctctggtggacgccggtgttccagcccgt
gacattgccgtggtctcgccgtacaacctccaggtggacctgctcagacagagcctcgcg
cataggtaccctgagcttgaaatcaagtctgttgatggcttccaaggccgagagaaggag
gccgtgatactgtccttcgtcaggtccaacaggaaaggtgaggttggttttcttgctgag
gaccggaggatcaatgtggctgtcacccgtgcccggcgccatgtggcggtcatctgtgac
tcccgtaccgtcaacaaccatgcatttttgaagaccctggtggagtatttcacccagcat
ggggaagtacgcacggcctttgagtatcttgatgatatcgtcccagaaaactattcccac
gagagctcccagggtcccagccacgtcgccaccaagacccagggttctgctgcatccgcc
aggaacggaagtcagtggcaggagggaggccaggaggctgcagcagctgccagacgcggc
cggaagaagccggctgggaagcttctgggcccagaagccccatctcagccgagtctcact
ggaggcagcccagagggagtggagagccaagatggcatggaccacttccgggccttgata
gcagagttcatggccagtgagaagatgcagttggagtttcctccttccctcaattctcac
gacaggctgcgggtccaccaaatagctgaggagcatgggctgaggcatgacagctctggg
gaagggaagaggaggttcatcaccgtgagcaagagggccctgccagccccacgaccccca
gcagttccaagacccccagcagatccggaacccccagcagccttgggattcctggccggg
actggcggcccagcccctctccagccggtgccccctagccctgtgcagacgaagcagcct
cccagggagcagcatggcccagagcagccagacctgaggacgctgcacctggagagactg
cagagggtcaggggctcacaggggcagccctccagcaaggagcagcaggcctcggggcag
cagaaacttccagaaaagaaaaagaaaaaagccaaaggacatccagccatagagctgccc
acagaggaggacttcgaagccctggtttcagctgccattaaggctgataacacttgtggc
tttgccaagtgcacagccagtgtcacgaccctgggccagttctgccatctctgtggccgc
cgctactgcctcagtcaccacctgcccgagatccatggctgcggcgagagggctcgagcc
cacgcccggcagaggatcagccgggaaggggtcctgtatgctggcagtgggaccaaggac
aggtccctggacccagccaagagggcccagctgcagaggaggctggataagaagctgggc
gagctcagcagccagaggaccagccggaggaaggagagggggacgtga
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integrated database retrieval system
