Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101044392
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Entry
101044392 CDS
T04350
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03030
DNA replication
sbq03420
Nucleotide excision repair
sbq03430
Mismatch repair
sbq03440
Homologous recombination
sbq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101044392 (RPA1)
03420 Nucleotide excision repair
101044392 (RPA1)
03430 Mismatch repair
101044392 (RPA1)
03440 Homologous recombination
101044392 (RPA1)
03460 Fanconi anemia pathway
101044392 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbq03000
]
101044392 (RPA1)
03032 DNA replication proteins [BR:
sbq03032
]
101044392 (RPA1)
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101044392 (RPA1)
Transcription factors [BR:
sbq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101044392 (RPA1)
DNA replication proteins [BR:
sbq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101044392 (RPA1)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101044392 (RPA1)
MMR (mismatch excision repair)
101044392 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
101044392 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
101044392
NCBI-ProteinID:
XP_010338349
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MQQQDTSIKPILQVIVTFMLATQLNTLVEEGQLASNCVCRINRFIVNTLKDGRRVVILME
LDVLKSAEAVGIKIGNPVPYNEGHGQQQVAPPPVPAASPASSKPQPQNGSSGVGSTVPKA
YGASKTFGKAGGPSLSSTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE
GKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEM
TFNNETSVMPCEDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDAIKITVRSNN
REVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSST
IILNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGLGGSNTNWKTLYEVKSENLGQGDK
PDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSV
NIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKV
ETYNDESRIKATVMDVKPVDYREYGRRLVQSIRRNASM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaggatacatccatcaaacccatcctccaagtcatcgtaactttcatgttg
gccacacagttgaacactcttgttgaggaaggacagttggccagcaactgcgtttgccgg
attaaccgattcattgtcaacaccctgaaggacggaaggagagtagttattttgatggaa
ttagacgttttgaaatcagctgaagccgttggaataaagattggcaatccagtgccctat
aatgaaggacatgggcagcagcaggtggctcctcctccagttccagctgccagcccagcg
agcagcaagccccagccacagaatggaagctcaggagtgggttccactgttcctaaggct
tatggtgcgtcgaagacatttggaaaagctggaggtcccagcctgtccagcacttccggg
ggaacacaggccaaagtggtgcccattgccagcctcaccccttaccagtccaagtggacg
atttgtgctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaa
gggaagctgttctctctagaattagttgatgaaagtggtgaaatcagagctacagctttc
aatgagcaagtggacaagttctttccccttattgaagtgaacaaggtatattatttctca
aaaggcaccctgaagattgctaacaaacaattcacagctgttaaaaatgactacgagatg
accttcaataatgagacttccgtcatgccctgtgaagatgatcatcatttgcctaccgtt
cagtttgattttacagggattgatgacctagagaacaagtctaaagactcacttgttgac
ataattgggatctgcaagagctatgaagatgccattaaaatcacagtgaggtctaacaac
agagaggttgctaagaggaatatctacttgatggacacgtcagggaaggtggtgactgct
acgctgtggggggaagatgctgataaatttgatggttccagacagcctgtgctggctatc
aaaggagccagagtctctgatttcggtggacggagcctctccgtgctgtcttccagcaca
atcatcctcaatcctgacatcccagaggcctataagcttcgtggatggtttgactcggaa
ggacaagccttagatggcgtttccatctctgatctaaagagcggtggacttggagggagc
aacaccaactggaagaccttgtatgaggtcaaatcagagaacctgggccaaggcgacaag
ccggactactttagctccgtggccacagtggtgtatcttcgcaaagaaaactgcatgtac
caggcctgcccgactcaggactgcaataagaaagtgattgatcagcagaatggcttatac
cgctgtgagaagtgtgacactgaattccccaatttcaagtaccgcatgatcctgtcggta
aatattgcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagct
atccttggacaaaatgctgcctatcttggagaattaaaagacaagaatgaacaggcattt
gaagaagttttccagaatgccaacttccgatccttcatattcagagtcagggtcaaagta
gagacctacaatgacgagtctcgaattaaggccactgtgatggatgtgaagcctgtggac
tacagagagtatggcagaaggctggtccagagcatccggagaaatgcatcaatgtga
DBGET
integrated database retrieval system
