Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101045722
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Entry
101045722 CDS
T04350
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03015
mRNA surveillance pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101045722 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
101045722 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101045722 (PABPC1L)
03041 Spliceosome [BR:
sbq03041
]
101045722 (PABPC1L)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101045722 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
101045722 (PABPC1L)
Spliceosome [BR:
sbq03041
]
Complex C
Other components
Complex C specific factors
101045722 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101045722
NCBI-ProteinID:
XP_003936459
UniProt:
A0A2K6S3B6
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDEHGSRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHFKSRRERA
AELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDSSGRSRCFGFVNFEK
HEEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKN
LDDSIDDGKLRKEFSPYGVITSAKVMTEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRVSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY
YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRCPPAHIGGIRQASTQVPRTVPHTQR
VANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTDQVQEPAVHIPGHEPLTASMLAAAP
LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL
QAHQAVEQPKAFMH
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagtggctcgggctacccgcttgcctctctctacgtgggcgatctgcacccc
gacgtgaccgaggcaatgctctacgagaagttctctcccgccggctccatcctgtccatc
cgcgtgtgtcgcgatgtggccacccggcgctcgctgggctacgcctacatcaacttccag
cagcccgccgacgcggagcgggcactggacacaatgaactttgagatgctcaaaggccag
cctattcgcatcatgtggtcccaaagagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttgtatgataccttctcc
acctttgggaacatcctctcttgcaaggtggtgtgtgacgagcatggctcccgcggtttc
ggcttcgttcattttgagacctatgaggccgcacagcaggccatcaacaccatgaacggg
atgctgctgaatgaccgcaaagtctttgtgggccacttcaagtctcgacgggagcgggcg
gcggagctgggagcgcgagccctggagttcaccaacatctacgtgaagaacctcccggcg
gatgtggacgagcaaggcctgcaggacctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggacagcagcggccgctcgcggtgctttggctttgttaactttgagaag
cacgaggaagcccagaaggctgtggtccatatgaatgggaaggaggtgagcgggcggctg
ctatatgcgagccgggcccagaagcgcgtggagcggcagaatgaactgaagcgcaggttt
gagcagatgaagcaggaccggctgagccgttatcagggtgtgaacttgtacgtgaagaac
ctggatgactccattgatgatggcaaactgaggaaagagttctctccctatggagtgatt
accagtgcgaaggtgatgacagagggtagccacagcaaggggtttggctttgtgtgtttt
tcctccccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcacc
aagccactctatgtggcactggcccagcgcaaagaggagcggaaggccatcttgaccaac
cagtacatgcagcgtgtctccaccatgcggaccctgagcaaccccctcttgggttccttt
cagcagccctccagctacttcctgcctgccgtgccccagcctccagcccaggctgcatac
tatggctgtggcccagtgacacccacccagcctgcccccaggtggacatcccagccacct
agaccttcctgtgcctcaatggttcggccaccagtgatgcctcggtgccccccggcccac
atcggcggtatcaggcaggcctccacccaggtgccacgtacggtgccccacactcagaga
gtggccaacattggtactcagaccacaggacccagtggggtaggatgctgcacgccaggc
cggcctctcctgccgtacaagtgttcttcagcagcacacagcaccgatcaggtccaggag
ccggctgtgcacatcccaggacatgagcccctgactgcgtccatgctggctgcggcgccc
ctgcatgagcaaaagcagatgattggggagcgtctctacccccttatccatgatgtccac
acccagctggctggcaagatcacgggcatgctgctggagattgacaactcggagctgttg
ctcatgctggagtctccagagtccctccatgccaagatagacgaagcagtggccgtgctg
caggcacaccaggctgtggagcagccgaaggcgttcatgcactga
DBGET
integrated database retrieval system
