Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101046225
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Entry
101046225 CDS
T04350
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbq04121
]
101046225 (TRIM56)
Enzymes [BR:
sbq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101046225 (TRIM56)
Ubiquitin system [BR:
sbq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101046225 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
DUF1804
Motif
Other DBs
NCBI-GeneID:
101046225
NCBI-ProteinID:
XP_003934208
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MVSHGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLANGGHVRCPECR
ETVPVPPEGVAAFKTNFFVNGLLDLVKARACGDLRAGKPACALCPLVGGTSAGGPATARC
LDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLLELEAERRVEKET
LTRLREQAARVGTQVEEAAEGVLRALLAQKQEVLGRLRAHVEAAEEAARERLAELEAAFA
RRVLSLGREAEILSLEGAIAQRLRQLQGCPSARGPSPCLVPQLELHPGLLDRNCHLLRLS
FEEQQPQKDGGKDGAGTQGGEESQSQREDAAKTERQGGTQLQARDEAQTPKEIKAQTPRE
DKAPMPQEDGAQTLEEDRAQTPHEDGGPQPQRGGRSNKKRKFKGRLKSVSREPSPALGPN
LDSSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRVLKRFSLNGDYK
GTVPVPEGCSPCSVAALQSAVAFSAGARLYLISPDGEVQWRRALSLSQASHAVAALPGGD
RVAVSVAGHVEVYNMEGSLATRFIPGGKASRGLRALVFLTTSPQGHFVGSDWQQNSVVIC
DGLGQVVGEYKGPGLHGCQPGSVSVDKKGYIFLTIREVNKVVILDPKGSLLGDFLTAYHG
LEKPRVTAMVDGRYLVVSLSNGTIHVFRVRSSDS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccatgggtcctcgccctccctcctagaggccctgagcagcgacttcctggcc
tgtaaaatctgcctggagcagctgcgggcacccaaaaccctgccctgcctgcatacctac
tgccaggactgcctggcccagctggccaatggcggccacgtgcgctgccccgagtgccgt
gagaccgtgcctgtgccgcccgagggcgtggccgccttcaagaccaacttcttcgtcaat
ggactgctggatctggtgaaggcccgggcctgcggagacctgcgtgccgggaagccggcc
tgtgccctgtgtcccctggtggggggcaccagcgccggagggccggccacggcccggtgc
ctggactgtgccgacgacttgtgccaggcctgtgctgacgggcaccgctgcacccgccag
actcactcccaccgcgtggtggacctggtgggctacagggcagggtggtacgacgaggag
gcccgggagcgccaggcggcccagtgtccccagcaccccggggaggcactgcgcttcctg
tgccagccctgctcgcagctgctgtgcagggagtgccgcctggacccccacctggaccac
ccctgcctgcccctggccgaggctgtgcgtgcccggaggccaggcctggaggagctgctg
gctggtgtggacaataacctgctagagctggaggcagaacggagggtggagaaggaaacg
ctgacccggctgcgggagcaggcagcccgggtggggacacaggtggaggaggcggccgag
ggcgtcctcagggccttgctggcccagaagcaggaggtgctggggcggctgcgagcccac
gtggaggctgccgaagaggctgctcgggagaggctggcagagctcgaggccgccttcgcc
cgccgggtactcagcctggggcgagaggctgagatcctttccctggaaggggcgattgcg
cagcggctccggcagctacagggctgcccctcggcccgggggccgtccccctgcctggtc
ccacagctggagctccatcctgggctcctggacaggaactgccacctgcttcggctgtcc
ttcgaggagcagcagcctcagaaggatggtgggaaggatggagccggcacccagggaggt
gaggagagccagagccagagggaggatgccgcaaagacagagagacagggtgggacccag
ctccaggccagagatgaagcccagaccccaaaagagataaaagcccagacaccccgagaa
gacaaagcaccgatgccccaagaagatggagcccagaccttggaagaggacagagcccag
acgccccacgaggatggaggaccccagccccagaggggtggcaggtccaacaagaagagg
aagttcaagggcaggctcaagtcagtctcccgggagcccagcccagccctggggccgaac
ctggacagctctggcctcctccccaggcccatcttttcctgcagtttccccacacggatg
cctggagacaagaggtccccccggatcaccgggctctgtcccttcggcccccgggagatc
ctggtggcagatgagcagaaccgggtgctgaaacgcttctccctcaatggcgactacaag
ggcaccgtgcccgtccctgagggctgctctccttgcagcgtggcggccctgcagagcgcc
gtggccttctctgcaggtgcaaggctctatctcatcagccccgacggtgaggtgcagtgg
cgccgggccctgagcctctcccaggccagccacgccgtggctgcgctgccaggtggggac
cgcgtggccgtcagcgtggcgggtcatgtggaggtgtacaatatggaaggcagcctggcc
acccggttcatccctgggggcaaggccagccggggcctgcgggcgctggtgtttctgacc
accagcccccaggggcatttcgtggggtcggattggcagcagaatagtgtggtaatctgc
gacgggctgggccaggtggttggggagtacaaggggccgggcctgcacggctgccagccg
ggctccgtgtctgtggataagaagggctacatcttcctgaccattcgagaagtcaacaag
gtggtgatcctggacccgaaggggtcactccttggagacttcctgacggcataccacggc
ctggaaaagccccgggttaccgccatggtggacggcaggtacctggtcgtatccctcagt
aatgggaccatccatgtctttcgggtccgttcttcagacagttaa
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integrated database retrieval system
