Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101047338
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Entry
101047338 CDS
T04350
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101047338 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101047338 (BARD1)
04121 Ubiquitin system [BR:
sbq04121
]
101047338 (BARD1)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101047338 (BARD1)
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101047338 (BARD1)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101047338 (BARD1)
Ubiquitin system [BR:
sbq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101047338 (BARD1)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101047338 (BARD1)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101047338 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
zf-C3HC4
zf-C3HC4_2
NIBRIN_BRCT_II
zf-rbx1
FliL
Motif
Other DBs
NCBI-GeneID:
101047338
NCBI-ProteinID:
XP_003925621
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MPGNRQPTVRSGNEPCSAPAMGPAGGGAWAHSRAALDRLEKLLRCSRCNNILREPVCLGG
CEHIFCSNCVSDCIGTECPVCYTPAWIQDVKINRQLNSMIQLCSKLRNLLHDSKLSELKE
DKPRTRLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPEIKKDVNAQQDSMYEFVS
TTPPADVSEKAKKPSARSLKKKTLAEINQKWNLQAEKEDGKFDSKEESKQKLVSFCSQPS
VITSPEINGEIDLLASGSLTESECFGSLTEVSLPLAEQIDSPDTNSRNEIVTPEKVCKNY
LTSKKSLPLENNGKCGQHNRRSSPISKRCRSSILSTSGDFVKQMVPSENIPLPESSLPPS
CKRKVRGTSGRKNSNMSDEFISLSPGTPPSTLNSSRYRRVTSSPSAMKLLPNMAGKRNHR
GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV
NTTGYQNDSPLHDAAKNGHMDIVKLLLSCGASRNAVNIFGLRPVDYTDDEDMKSLLLLPE
KNESSSTSHCSVVNTGQRKDGPLVLIGSGLSSEQQKMLSELAAILKAKKCTEFDSTVTHV
VVPGDEVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPQRSRLNREQL
LPKLFDGCYFYFGGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPD
SDQRFCTQYIIYENLSNYHPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgaccgtccgctccgggaacgagccttgctctgcgccagcc
atgggtccggccggtggcggggcgtgggcccacagccgagccgcgctcgaccgcctggag
aagctgctgcgttgctcgcgttgcaataacattctgagagagcctgtatgcttaggaggt
tgtgaacacatcttctgtagtaattgtgtaagcgactgtattggaactgaatgtccagtg
tgttacaccccagcctggatacaagatgtgaagattaatagacaactgaacagtatgatt
caactttgtagtaagcttcgaaatttgctacatgacagtaagctctcagaattgaaagaa
gataaacctaggacaaggttgtttaatgatgcagaaaacaagaagaattcaattaaaatg
tggtttagccctcgaagtaagaaagtcagatatgttgtgagtaaagtttcagtgcagacc
cagcctgaaataaaaaaagatgtaaatgctcagcaagactcaatgtatgaatttgtttcc
acaactcctcctgcagatgtttctgagaaggctaaaaagccttctgcaagatctctaaaa
aagaaaactttagctgaaatcaaccaaaaatggaatttacaggcagaaaaagaagatggc
aaatttgattccaaagaggaatcgaagcaaaagctggtatccttctgtagccaaccatcc
gttatcaccagccctgagataaatggtgaaatagacttactagcaagtggctccttgaca
gaatctgaatgtttcggaagtttaactgaagtctctttaccattggctgagcaaatagac
tctccagacactaacagcaggaatgaaatagtgactcctgagaaggtctgcaaaaattat
cttacgtctaagaaatctttgccattagaaaataatggaaaatgtggccaacacaataga
cgttccagtcccatttctaagagatgtagaagcagcattctgagcaccagtggagatttt
gttaagcaaatggtgccctcagaaaatattccattgcctgaaagttctttgccaccttcc
tgcaaacgtaaagttcgtggtacatcggggaggaaaaacagtaatatgtcagacgaattc
attagtctttcaccaggtacaccaccttctacattaaatagttcaaggtacagacgagtg
acatctagcccctcagcaatgaagctgttacccaatatggctgggaaaagaaatcataga
ggagagactttgctccatattgcttctattaagggtgatataccttctgttgaatacctt
ttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacaccattgcatgaa
gcttgcaatcatgggcacctgaaggtagtggaattactgctccagcataaggcgttggtg
aacaccactggatatcaaaatgactcaccacttcacgacgcagccaagaatgggcacatg
gatatagtcaagctgttactttcctgtggagcctccaggaatgctgttaacatatttggt
ctgcggcctgtggattatacagacgatgaagatatgaagtcactattgctgctaccagag
aagaatgaatcatcctcaaccagccattgctcggtagtgaacactgggcagcgtaaggat
ggacctcttgtacttataggcagtgggctttcttcagaacaacagaaaatgctcagtgag
cttgcagcaattcttaaggctaaaaaatgtactgagtttgacagcacagtaactcatgtt
gttgttcctggtgatgaagttcaaagtaccttgaagtgtatgcttgggattctcaatgga
tgctggattctaaaatttgaatgggtaaaagcatgtctacgaagaaaagtatgtgaacag
gaagaaaagtacgaaattcctgaaggtccacagagaagcaggctcaacagagaacagctg
ttgccaaagctgtttgatggatgctacttctattttgggggaaccttcaaacaccatcca
aaggacaaccttattaagctcgtcactgcaggtgggggccagatcctcagtagaaagccc
aagccagacagtgacgtgactcagaccatcaatacagtcgcataccatgccagacctgat
tctgatcagcgcttctgcacacagtatatcatctatgagaatttgtctaattatcaccca
gagagggttcgtcagggcaaagtctggatggctccttcgagctggtttatagactgtgtg
atgtcctttgagttgcttcctcttgacagctga
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integrated database retrieval system
