Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101048220
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Entry
101048220 CDS
T04350
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101048220 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbq04990
]
101048220 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
sbq04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101048220 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101048220
NCBI-ProteinID:
XP_010338440
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All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLTIDGISAQG
MTHLEAQNKIKGCTGSLNMTLQRASATPKSEPVPVQKGEPKEVVKPVPITSPAVSKITST
TNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHSTTSSHASPPPMAAAVTPPPFAASGL
HANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGKI
PPKRPPRKHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTE
HLKESETDNTKKANNSQEPSPQLASSVASTRSMLESLDSPAPGRPGVASLATAAAFKPVG
STSIIKSPSWQRPNQAVPSTGRISNSATSSGAVAPANSALGQPQPSDQDTLVQRAEHIPA
GKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEK
FFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYAL
FGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHS
VNF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtcactggttggcccagctccttggggtttcaggctgcaaggc
ggcaaggatttcaacatgcctctgacaatttctagtctaaaagatggcggcaaggcagcc
caggcaaatgtaagaataggtgatgtggttctcaccattgatggaataagtgcacaagga
atgactcatcttgaagcccagaataagattaagggttgtacaggctctttgaatatgact
ctgcaaagagcatctgctacacccaagtctgagccagttcctgttcaaaagggagaacct
aaagaagtagttaaacctgtgcccattacatctcctgctgtgtccaaaatcacttccaca
accaacatggcctacaataaggcaccacggccttttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtctgccttcaccccagcccattcgaccacttcatcacat
gcttcccctccacccatggctgctgccgtcactcctcccccgttcgctgcatctggactg
catgctaatgccaatcttagtgctgaccagtctccatctgcactgagtgctggtaaaact
gcagttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagacttctcaggag
ctagcagagggacagagaagaggatcccagggtgacagtaaacaacaaaatgggaaaatt
ccacctaaacgcccaccaagaaaacacattgtggagcgcaatacagagttttatcatata
cccactcacagtgatgccagcaagaagagactgattgaggatactgaagactggcgtcca
aggactggaacaactcagtctcgctctttccgaatccttgcccagatcactgggactgaa
catttgaaagaatctgaaaccgataatacaaagaaggcaaataactctcaggagccttct
ccacagttggcttcctcagtagcttccacacggagcatgctggaaagcctggacagccca
gcccctggcagacccggggtggccagcctcgccactgcagctgccttcaaacctgtagga
tccaccagtatcatcaagtcaccaagctggcaacggccaaaccaagcagtaccttccact
ggaagaatctcaaacagtgctacttcctcaggagcagtggcaccagccaactcagctttg
ggacaacctcagccaagcgaccaggacactttagtgcaaagagctgagcacattccagca
gggaaacgaactccaatgtgtgcccactgtaaccaggtcatcagaggaccattcttagtg
gcactggggaaatcttggcacccggaagaatttaactgtgctcactgcaaaaatacaatg
gcctacattggatttgtagaggaaaaaggagccctatattgtgagctttgctatgagaaa
ttcttcgctcctgagtgtggtagatgccaaaggaagatccttggagaagtcatcaatgcg
ttaaaacaaacttggcatgtttcctgtttcgtgtgtgtagcctgtggaaagcccattcgg
aacaatgtttttcacctggaggatggtgaaccctactgtgagactgattattatgccctc
tttggtactatatgccatggatgtgagtttcccatagaagctggtgacatgttcctggaa
gctctgggctacacctggcatgacacttgctttgtatgctcagtgtgttgtgaaagtttg
gaaggtcagacctttttctccaagaaggacaagccactgtgtaagaaacatgctcattct
gtgaatttttga
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